RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 PMS2CLQ68D20 193 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ARMCX6Q7L4S7 300 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 RASSF3Q86WH2 238 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 BBS7Q8IWZ6 715 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 FRMD1Q8N878 549 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 HMGB4Q8WW32 186 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 OVCA2Q8WZ82 227 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CNOT6LQ96LI5 555 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 KCTD10Q9H3F6 313 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 BCCIPQ9P287 314 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 RCOR1Q9UKL0 485 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 MYH10P35580 1976 aa12.32□□□□□ -0.44
CDK5RAP3-223ENST00000582114 E2F8A0AVK6 867 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 LNP1A1A4G5 178 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TBC1D3BA6NDS4 549 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TRIM24O15164 1050 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ADAM23O75077 832 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 HLA-DRAP01903 254 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TRIM49P0CI25 452 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TRIM49CP0CI26 452 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 P4HA1P13674 534 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 GRIA2P42262 883 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 WASP42768 502 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CLDN10P78369 228 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ZACNQ401N2 412 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 BTBD8Q5XKL5 378 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PSAPL1Q6NUJ1 521 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 SV2AQ7L0J3 742 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 GPRIN1Q7Z2K8 1008 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TMEM25Q86YD3 366 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PGBD3Q8N328 593 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PIGKQ92643 395 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 NUDT5Q9UKK9 219 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 MAPK8IP1Q9UQF2 711 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 FRMD4BQ9Y2L6 1034 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 NUP205Q92621 2012 aa12.31□□□□□ -0.44
CDK5RAP3-223ENST00000582114 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TCRBV21S2A2A0A5A6 115 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 GIPC1O14908 333 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 MDM4O15151 490 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CYP26A1O43174 497 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TLR5O60602 858 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 KCNK5O95279 499 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 RPN1P04843 607 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 FAM200BP0CF97 657 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PDIA4P13667 645 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 EIF2DP41214 584 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 KIR2DL1P43626 348 aaPredicted RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ASPAP45381 313 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 GCLMP48507 274 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 GAD2Q05329 585 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ST3GAL2Q16842 350 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 EOGTQ5NDL2 527 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 C1orf220Q5T0J3 134 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 C10orf76Q5T2E6 689 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ATL3Q6DD88 541 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TMEFF1Q8IYR6 380 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PHTF2Q8N3S3 785 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TWNKQ96RR1 684 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 SPHK2Q9NRA0 654 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 IL37Q9NZH6 218 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ACACBO00763 2458 aa12.3□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CNOT1A5YKK6 2376 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 NEDD8-MDP1E9PL57 170 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 PDXKO00764 312 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 MAP3K13O43283 966 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TULP3O75386 442 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 KIF20AO95235 890 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CD58P19256 250 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CMA1P23946 247 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TUBP50607 506 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 NOVA1P51513 510 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 VAMP7P51809 220 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 SNX30Q5VWJ9 437 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TPGS1Q6ZTW0 290 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ETFBKMTQ8IXQ9 262 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 ZNF513Q8N8E2 541 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 KIAA1958Q8N8K9 716 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 OLIG1Q8TAK6 271 aa12.29□□□□□ -0.44
CDK5RAP3-223ENST00000582114 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms