RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 STAG1Q8WVM7 1258 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 HOOK2Q96ED9 719 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 HSPBAP1Q96EW2 488 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 CGRRF1Q99675 332 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 VN1R3Q9BXE9 311 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 SLCO5A1Q9H2Y9 848 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 IP6K2Q9UHH9 426 aa4.24□□□□□ -1.73
SMCHD1-206ENST00000581631 A0A088AWK7 358 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 LOC105371045A0A1W2PR82 267 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 PSMD9O00233 223 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 T-ENOLP0DO92 83 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 PLA2G2AP14555 144 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 NPR1P16066 1061 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 PRKAG1P54619 331 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 TIRAPP58753 221 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 RAB1AP62820 205 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 IGBP1P78318 339 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 B4GALNT1Q00973 533 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 SLC14A1Q13336 389 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 CTBP1Q13363 440 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 KCNB1Q14721 858 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 ZNF750Q32MQ0 723 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 SLC9C1Q4G0N8 1177 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 ZNF585BQ52M93 769 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 RAB11FIP4Q86YS3 637 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 DCP1BQ8IZD4 617 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 ZBTB8BQ8NAP8 495 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 KBTBD7Q8WVZ9 684 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 HPS3Q969F9 1004 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 PPP2R3CQ969Q6 453 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 EDC3Q96F86 508 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 TRIM5Q9C035 493 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 SMURF2Q9HAU4 748 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 TRIM36Q9NQ86 728 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 SNX15Q9NRS6 342 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 DDX56Q9NY93 547 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 ICKQ9UPZ9 632 aa4.23□□□□□ -1.73
SMCHD1-206ENST00000581631 ERVV-2B6SEH9 535 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 ALDH1L1O75891 902 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 PDGFRBP09619 1106 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 PF4V1P10720 104 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 MCM5P33992 734 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 ZXDBP98169 803 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 ATAT1Q5SQI0 421 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 VSTM1Q6UX27 236 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 DNAJB14Q8TBM8 379 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 MTFMTQ96DP5 389 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 ZNF479Q96JC4 524 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 MS4A7Q9GZW8 240 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 ARMT1Q9H993 441 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 TCF7L1Q9HCS4 588 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 MLXIPLQ9NP71 852 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 XPNPEP3Q9NQH7 507 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 TYW1Q9NV66 732 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 PIH1D1Q9NWS0 290 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 DNMT3BQ9UBC3 853 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 CPA4Q9UI42 421 aa4.22□□□□□ -1.73
SMCHD1-206ENST00000581631 IGLV5-39A0A0G2JS06 123 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 TMEM233B4DJY2 109 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 MYO1CO00159 1063 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 FOXN3O00409 490 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 TMPRSS11DO60235 418 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 CT47B1P0C2W7 299 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 UQCRC1P31930 480 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 TTF1Q15361 905 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 KRTAP27-1Q3LI81 207 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 CCDC157Q569K6 752 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 DENND2CQ68D51 928 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 LMBRD2Q68DH5 695 aaPredicted RBP4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 MDFICQ9P1T7 246 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 SEMA5BQ9P283 1151 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 STAP2Q9UGK3 403 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 MAFFQ9ULX9 164 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 CDY1Q9Y6F8 540 aa4.21□□□□□ -1.74
SMCHD1-206ENST00000581631 LACTBL1A8MY62 500 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 ZNF814B7Z6K7 855 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 BTN3A1O00481 513 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 CD3EAPO15446 510 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 TLX3O43711 291 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 EPN2O95208 641 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 CREB1P16220 341 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 EPHA3P29320 983 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 MCL1Q07820 350 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 MFSD13AQ14CX5 517 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 EARS2Q5JPH6 523 aaKnown RBP4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 DCAF12L1Q5VU92 463 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 RAPGEF4Q8WZA2 1011 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 MAML1Q92585 1016 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 NUP88Q99567 741 aaPredicted RBP4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 ZPBPQ9BS86 351 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 SLC12A5Q9H2X9 1139 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 ANKRD6Q9Y2G4 727 aa4.2□□□□□ -1.74
SMCHD1-206ENST00000581631 C2CD4BA6NLJ0 364 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 CLIC1O00299 241 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 KRT10P13645 584 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 NCLP19338 710 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 DEUP1Q05D60 604 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 PIN1Q13526 163 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms