RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PTF1AQ7RTS3 328 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 KDELC2Q7Z4H8 507 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 TBC1D1Q86TI0 1168 aaPredicted RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 LRRC49Q8IUZ0 686 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 RMDN3Q96TC7 470 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 MPHOSPH8Q99549 860 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 BAG1Q99933 345 aaPredicted RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 MYOCQ99972 504 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 SLC39A3Q9BRY0 314 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 SLC13A1Q9BZW2 595 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 PUS7LQ9H0K6 701 aaKnown RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 MYLK2Q9H1R3 596 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 ZNF304Q9HCX3 659 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 FANCFQ9NPI8 374 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 TCF7L2Q9NQB0 619 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 STARD7Q9NQZ5 370 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 HPF1Q9NWY4 346 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 DONSONQ9NYP3 566 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 PDP2Q9P2J9 529 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 LRCH1Q9Y2L9 728 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 PCDHGB3Q9Y5G1 929 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 ACTL7AQ9Y615 435 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 DDX49Q9Y6V7 483 aaKnown RBP4.4□□□□□ -1.71
SMG8-205ENST00000580798 FANCIQ9NVI1 1328 aa4.4□□□□□ -1.71
SMG8-205ENST00000580798 A0A0B4J203 849 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 CCDC69A6NI79 296 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 HNRNPCL2B2RXH8 293 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 M0QX08 132 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 TRIM38O00635 465 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 USO1O60763 962 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 HNRNPCL1O60812 293 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 ABLIM3O94929 683 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 SNUPNO95149 360 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 IL33O95760 270 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 MTHFD2P13995 350 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 TMOD1P28289 359 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 ELF1P32519 619 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 CHKAP35790 457 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 STAT1P42224 750 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 MCAMP43121 646 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 PSMC4P43686 418 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 TNNT3P45378 269 aaPredicted RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 BTKQ06187 659 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 FAPQ12884 760 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 PPFIA1Q13136 1202 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 RABEP1Q15276 862 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 OASLQ15646 514 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 PKN2Q16513 984 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 NUGGCQ68CJ6 796 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 PLBD1Q6P4A8 553 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 FIP1L1Q6UN15 594 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 KDELC1Q6UW63 502 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 ANGPTL8Q6UXH0 198 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 UBE3BQ7Z3V4 1068 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 VSIG1Q86XK7 387 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 GALNT13Q8IUC8 556 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 CARNMT1Q8N4J0 409 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMG8-205ENST00000580798 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 TIGD1Q96MW7 591 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 BARD1Q99728 777 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 NCAPGQ9BPX3 1015 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 FSD1Q9BTV5 496 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 ADI1Q9BV57 179 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 BRD9Q9H8M2 597 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 GRPEL1Q9HAV7 217 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 ARFGAP3Q9NP61 516 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 MED4Q9NPJ6 270 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 TRPV5Q9NQA5 729 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 TMEM140Q9NV12 185 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 SEPT11Q9NVA2 429 aaKnown RBP4.39□□□□□ -1.71
SMG8-205ENST00000580798 QPCTLQ9NXS2 382 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 NSMCE4AQ9NXX6 385 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 FAM30AQ9NZY2 134 aa4.39□□□□□ -1.71
SMG8-205ENST00000580798 LINC00854A0A1B0GVQ3 168 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 MANSC4A6NHS7 340 aaPredicted RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 TRIM75PA6NK02 468 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 RASA4BC9J798 803 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 PLOD2O00469 737 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 BRINP1O60477 761 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 STAMBPO95630 424 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 DDX58O95786 925 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 GUCA1CO95843 209 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 CD4P01730 458 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SLC4A1P02730 911 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 RHOXF2BP0C7M4 288 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 MYCLP12524 364 aaPredicted RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 ZKSCAN1P17029 563 aaPredicted RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 CD9P21926 228 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 SLC6A9P48067 706 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 VAV2P52735 878 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 AP2B1P63010 937 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 MPP1Q00013 466 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 MALLQ13021 153 aa4.38□□□□□ -1.71
SMG8-205ENST00000580798 EZH2Q15910 746 aaKnown RBP4.38□□□□□ -1.71
SMG8-205ENST00000580798 TAF12Q16514 161 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms