RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TADA3O75528 432 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 CFHP08603 1231 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 GJA1P17302 382 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
SS18-216ENST00000580751 CDH5P33151 784 aaPredicted RBP16.31■□□□□ 0.2
SS18-216ENST00000580751 ACADSBP45954 432 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 RGS7P49802 495 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 SNX16P57768 344 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 CYP4F8P98187 520 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 ZP2Q05996 745 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 ADIGQ0VDE8 80 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 PDCLQ13371 301 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 GPR158Q5T848 1215 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 ZNF571Q7Z3V5 609 aaPredicted RBP16.31■□□□□ 0.2
SS18-216ENST00000580751 GPIHBP1Q8IV16 184 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 MYADMQ96S97 322 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 AGPAT1Q99943 283 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 CNGB3Q9NQW8 809 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 TLR8Q9NR97 1041 aaKnown RBP16.31■□□□□ 0.2
SS18-216ENST00000580751 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 EPS15L1Q9UBC2 864 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 MYO16Q9Y6X6 1858 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 BDP1A6H8Y1 2624 aa16.31■□□□□ 0.2
SS18-216ENST00000580751 ZNF840PA6NDX5 716 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 C2CD4DB7Z1M9 353 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 FBXO21O94952 628 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 ZBED1O96006 694 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 MMEP08473 750 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 GZMAP12544 262 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 LAMP2P13473 410 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 PFKLP17858 780 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 TNFAIP3P21580 790 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 SP100P23497 879 aaPredicted RBP16.3■□□□□ 0.2
SS18-216ENST00000580751 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
SS18-216ENST00000580751 PSEN1P49768 467 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 MON1AQ86VX9 555 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 ZDHHC14Q8IZN3 488 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 SCML4Q8N228 414 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 ARHGAP18Q8N392 663 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 C1orf131Q8NDD1 294 aaKnown RBP16.3■□□□□ 0.2
SS18-216ENST00000580751 SLC30A5Q8TAD4 765 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
SS18-216ENST00000580751 SLC20A1Q8WUM9 679 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 SLC4A5Q9BY07 1137 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 TASP1Q9H6P5 420 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 GMIPQ9P107 970 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 INTUQ9ULD6 942 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 OBSL1O75147 1896 aa16.3■□□□□ 0.2
SS18-216ENST00000580751 LOC730098B7Z3J9 87 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 NRG2O14511 850 aaPredicted RBP16.29■□□□□ 0.2
SS18-216ENST00000580751 SART1O43290 800 aaKnown RBP16.29■□□□□ 0.2
SS18-216ENST00000580751 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 ZDHHC11BP0C7U3 371 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 LCP1P13796 627 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 TUBP50607 506 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 FMO1Q01740 532 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 STXBP5Q5T5C0 1151 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 PM20D1Q6GTS8 502 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 WDTC1Q8N5D0 677 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 IRGQQ8WZA9 623 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 MIS12Q9H081 205 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 SYNCQ9H7C4 482 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
SS18-216ENST00000580751 ADAMTS1Q9UHI8 967 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 CYTH4Q9UIA0 394 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 DENND4CQ5VZ89 1909 aa16.29■□□□□ 0.2
SS18-216ENST00000580751 TRAV19A0A0A6YYK7 116 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 E5RJQ4 531 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 ABL1P00519 1130 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 TUBB4AP04350 444 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 PLEKP08567 350 aaPredicted RBP16.28■□□□□ 0.2
SS18-216ENST00000580751 CHRNB2P17787 502 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 WEE1P30291 646 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 AVPR1AP37288 418 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 NOMO3P69849 1222 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 TXNDC8Q6A555 127 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 MTSS1LQ765P7 747 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 TADA2BQ86TJ2 420 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 MAB21L3Q8N8X9 362 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 ZSCAN18Q8TBC5 510 aaPredicted RBP16.28■□□□□ 0.2
SS18-216ENST00000580751 GOLGA1Q92805 767 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 CPXM1Q96SM3 734 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 CDK5RAP1Q96SZ6 601 aaKnown RBP16.28■□□□□ 0.2
SS18-216ENST00000580751 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
SS18-216ENST00000580751 TRPC7Q9HCX4 862 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 SEPT11Q9NVA2 429 aaKnown RBP16.28■□□□□ 0.2
SS18-216ENST00000580751 CLIC5Q9NZA1 410 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 CHORDC1Q9UHD1 332 aaPredicted RBP16.28■□□□□ 0.2
SS18-216ENST00000580751 NAGPAQ9UK23 515 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 NENFQ9UMX5 172 aa16.28■□□□□ 0.2
SS18-216ENST00000580751 PPP2R2CQ9Y2T4 447 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms