RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 PLA2G4AP47712 749 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 CACNA2D1P54289 1103 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 BST2Q10589 180 aaKnown RBP10.43□□□□□ -0.74
GGA3-209ENST00000580646 SDHAF4Q5VUM1 108 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 ZNF852Q6ZMS4 543 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 GAS2L3Q86XJ1 694 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 ZNF677Q86XU0 584 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 SCN4BQ8IWT1 228 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 YAF2Q8IY57 180 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 STK32AQ8WU08 396 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 ZNF606Q8WXB4 792 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 KCTD13Q8WZ19 329 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 TFAP2BQ92481 460 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 LRRC3BQ96PB8 259 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 SPAG5Q96R06 1193 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 SLC46A2Q9BY10 475 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 XPO4Q9C0E2 1151 aaKnown RBP10.43□□□□□ -0.74
GGA3-209ENST00000580646 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
GGA3-209ENST00000580646 RBSNQ9H1K0 784 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 FBXO44Q9H4M3 255 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 TMEM30AQ9NV96 361 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 OBP2AQ9NY56 170 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 MAGED2Q9UNF1 606 aaPredicted RBP10.43□□□□□ -0.74
GGA3-209ENST00000580646 DMDP11532 3685 aa10.43□□□□□ -0.74
GGA3-209ENST00000580646 SHISA7A6NL88 538 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 HHLA1C9JL84 531 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 PROB1E7EW31 1015 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 MAN2B1O00754 1011 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 CHADO15335 359 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 NCAM2O15394 837 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 CYP26A1O43174 497 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 BEST1O76090 585 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 CYP11B1P15538 503 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 PFKLP17858 780 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 DDX6P26196 483 aaKnown RBP eCLIP10.42□□□□□ -0.74
GGA3-209ENST00000580646 TARSP26639 723 aaKnown RBP10.42□□□□□ -0.74
GGA3-209ENST00000580646 NBL1P41271 181 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 RPL34P49207 117 aaKnown RBP10.42□□□□□ -0.74
GGA3-209ENST00000580646 PDE6CP51160 858 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 SLC5A3P53794 718 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 MAP3K7CLP57077 242 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 FCHO2Q0JRZ9 810 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 TRIM14Q14142 442 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 GOLGA7BQ2TAP0 167 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 RAB41Q5JT25 222 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 SNX30Q5VWJ9 437 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 CACNA2D4Q7Z3S7 1137 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 MTERF4Q7Z6M4 381 aaKnown RBP10.42□□□□□ -0.74
GGA3-209ENST00000580646 TMEM150AQ86TG1 271 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 TTC30AQ86WT1 665 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 C1orf210Q8IVY1 113 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 CMTM8Q8IZV2 173 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 SCML4Q8N228 414 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 STKLD1Q8NE28 680 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 PDZD8Q8NEN9 1154 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 BAP1Q92560 729 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 HSFY1Q96LI6 401 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 KCNK16Q96T55 309 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 ZSWIM1Q9BR11 485 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 LHX5Q9H2C1 402 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 NLRC4Q9NPP4 1024 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 MRPS17Q9Y2R5 130 aaKnown RBP10.42□□□□□ -0.74
GGA3-209ENST00000580646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.743e-6■■■□□ 16.8
GGA3-209ENST00000580646 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 SPTBN4Q9H254 2564 aa10.42□□□□□ -0.74
GGA3-209ENST00000580646 M0QYV0 167 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 ARNTLO00327 626 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 THAP12O43422 761 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 PRAMEF12O95522 483 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 FERP16591 822 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 BRD2P25440 801 aaKnown RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 CDH5P33151 784 aaPredicted RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 USP8P40818 1118 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 GPD2P43304 727 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 MAGEA9P43362 315 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 KIF11P52732 1056 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 MLLT6P55198 1093 aaPredicted RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 FZD5Q13467 585 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 ARHGAP29Q52LW3 1261 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 SPECC1LQ69YQ0 1117 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 PIGZQ86VD9 579 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 SLC47A2Q86VL8 602 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 MON1AQ86VX9 555 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 VSTM4Q8IW00 320 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 ZNF276Q8N554 614 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 MAB21L3Q8N8X9 362 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 BPIFB1Q8TDL5 484 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 CSGALNACT1Q8TDX6 532 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 EPS8L1Q8TE68 723 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 SLC35F5Q8WV83 523 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 DDX1Q92499 740 aaKnown RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 MRPS31Q92665 395 aaKnown RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 SYN2Q92777 582 aaPredicted RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 CLDN23Q96B33 292 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 SLITRK1Q96PX8 696 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 SMG9Q9H0W8 520 aaKnown RBP10.41□□□□□ -0.74
GGA3-209ENST00000580646 AIPL1Q9NZN9 384 aa10.41□□□□□ -0.74
GGA3-209ENST00000580646 CAPN11Q9UMQ6 739 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms