RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 NME5P56597 212 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 CRADDP78560 199 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 PDK1Q15118 436 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 RNF220Q5VTB9 566 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 IER5Q5VY09 327 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 BNC2Q6ZN30 1099 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 STRA8Q7Z7C7 330 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLC51AQ86UW1 340 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 SLC9A9Q8IVB4 645 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNF786Q8N393 782 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ALLCQ8N6M5 410 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZCWPW1Q9H0M4 648 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 UBP1Q9NZI7 540 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 SNX5Q9Y5X3 404 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ABCC6O95255 1503 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 SUPT20HL2P0C7V6 817 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 THRAP10827 490 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 GTF2BQ00403 316 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 TMEM161BQ8NDZ6 487 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 ASCC2Q9H1I8 757 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 CYP4F12Q9HCS2 524 aa14.06□□□□□ -0.16
TRAPPC8-207ENST00000580104 FMN2Q9NZ56 1722 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 WDR27A2RRH5 827 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 PGM3O95394 542 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 GSTT1P30711 240 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 VPS72Q15906 364 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZDHHC18Q9NUE0 388 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 TBC1D12O60347 775 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 PAEPP09466 180 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 DIS3LQ8TF46 1054 aaKnown RBP14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 FRMD8P1Q9BZ68 369 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 THAP1Q9NVV9 213 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 ROBO3Q96MS0 1386 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 LTN1O94822 1766 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 RARBP10826 455 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 DALRD3Q5D0E6 543 aaKnown RBP14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 RIPOR1Q6ZS17 1223 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 CLNKQ7Z7G1 428 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 DENND2DQ9H6A0 471 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 A0A0B4J269 797 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 DPPA5A6NC42 116 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 PSMC3P17980 439 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 UBAP2LQ14157 1087 aaKnown RBP14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 SAMD7Q7Z3H4 446 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 MAGEC3Q8TD91 643 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 MKL1Q969V6 931 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 CNDP1Q96KN2 507 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 EPAS1Q99814 870 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNRF3Q9ULT6 936 aa14.05□□□□□ -0.16
TRAPPC8-207ENST00000580104 SNX2O60749 519 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 KDELR1P24390 212 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 TDRD10Q5VZ19 366 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 GIPC2Q8TF65 315 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 TNIP3Q96KP6 325 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 GLIS2Q9BZE0 524 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 LRMDAQ9H2I8 198 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 SPC25Q9HBM1 224 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 ARHGEF38Q9NXL2 777 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 C2CD2LO14523 706 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 IL18RAPO95256 599 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 MMRN1Q13201 1228 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 STILQ15468 1287 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 C15orf59Q2T9L4 293 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 EML3Q32P44 896 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 TTC33Q6PID6 262 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 WNK4Q96J92 1243 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 CATSPER2Q96P56 530 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 EML4Q9HC35 981 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 IARS2Q9NSE4 1012 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 STXBP5LQ9Y2K9 1186 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 RGPD8O14715 1765 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 C5orf60A6NFR6 353 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 GOLGA8TH3BQL2 631 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 SRP72O76094 671 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 USP1O94782 785 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 HDAC4P56524 1084 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZNF268Q14587 947 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 INPP5AQ14642 412 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 UGCGQ16739 394 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 SEL1L3Q68CR1 1132 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 IFT43Q96FT9 208 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 CLPTM1LQ96KA5 538 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 EFCAB1Q9HAE3 211 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 CHST12Q9NRB3 414 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 CLIC5Q9NZA1 410 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 PIN4Q9Y237 131 aaKnown RBP14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 ZMYM2Q9UBW7 1377 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 ADGRA3Q8IWK6 1321 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 MGEA5O60502 916 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 HMGCRP04035 888 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 CYP2F1P24903 491 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 PKNOX1P55347 436 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 NOMO3P69849 1222 aa14.04□□□□□ -0.16
TRAPPC8-207ENST00000580104 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms