RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 FAM172AQ8WUF8 416 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ZMAT2Q96NC0 199 aaKnown RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 MECRQ9BV79 373 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF395Q9H8N7 513 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ARHGEF3Q9NR81 526 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 ASNSD1Q9NWL6 643 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 TUBGCP4Q9UGJ1 667 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 SMG5Q9UPR3 1016 aaKnown RBP10.93□□□□□ -0.66
TOP3A-209ENST00000580095 LTBP3Q9NS15 1303 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 MGAMO43451 1857 aa10.93□□□□□ -0.66
TOP3A-209ENST00000580095 CFAP73A6NFT4 308 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 IL18RAPO95256 599 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ANP32DO95626 131 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 MT-ND3P03897 115 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 EZRP15311 586 aaKnown RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 IL4RP24394 825 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 YY1P25490 414 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PHBP35232 272 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 SETDB1Q15047 1291 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 RNF43Q68DV7 783 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ASRGL1Q7L266 308 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ERO1BQ86YB8 467 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PLD5Q8N7P1 536 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 N4BP2L2Q92802 583 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PGLYRP2Q96PD5 576 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 CNPY3Q9BT09 278 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 CEP41Q9BYV8 373 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF408Q9H9D4 720 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PRMT7Q9NVM4 692 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 BARX2Q9UMQ3 279 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 SYNJ2BP-COX16A0A087WUM0 186 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 CCDC195A0A1B0GUA6 201 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 GAS2O43903 313 aaKnown RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 T-ENOLP0DO92 83 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 EPHB2P29323 1055 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ERFP50548 548 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 CRADDP78560 199 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 NR1H3Q13133 447 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 AP1ARQ63HQ0 302 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ADGRD1Q6QNK2 874 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 CDHR3Q6ZTQ4 885 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 GBP7Q8N8V2 638 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 GIMAP7Q8NHV1 300 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PCDH19Q8TAB3 1148 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 FNIP1Q8TF40 1166 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 MZB1Q8WU39 189 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ACAP3Q96P50 834 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 EIF2AQ9BY44 585 aaKnown RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 SLC13A1Q9BZW2 595 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 FBXO6Q9NRD1 293 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 TMPRSS4Q9NRS4 437 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 SNTG2Q9NY99 539 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 KLK14Q9P0G3 267 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 COX16Q9P0S2 106 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 SLC17A6Q9P2U8 582 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 SLC24A2Q9UI40 661 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 ZMYND8Q9ULU4 1186 aaPredicted RBP10.92□□□□□ -0.66
TOP3A-209ENST00000580095 STARD13Q9Y3M8 1113 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PPP2R3BQ9Y5P8 575 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 MAD1L1Q9Y6D9 718 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 IKBKGQ9Y6K9 419 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 PAPPA2Q9BXP8 1791 aa10.92□□□□□ -0.66
TOP3A-209ENST00000580095 H0Y3Z8 333 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 TSPAN1O60635 241 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 LPXNO60711 386 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 DIAPH2O60879 1101 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 NPTXRO95502 500 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 CCDC130P13994 396 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 BGNP21810 368 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 AKAP5P24588 427 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 ADORA2BP29275 332 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 RABGGTBP53611 331 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 YARSP54577 528 aaKnown RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 BCAR1P56945 870 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 IRX4P78413 519 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 GBE1Q04446 702 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 TAZQ16635 292 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 ZNF618Q5T7W0 954 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 CEP128Q6ZU80 1094 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 UNC5BQ8IZJ1 945 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 PQLC3Q8N755 202 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 NSMCE1Q8WV22 266 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 C10orf82Q8WW14 230 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 RNF157Q96PX1 679 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 NT5C1AQ9BXI3 368 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 RSAD1Q9HA92 442 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 USP29Q9HBJ7 922 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 SETD4Q9NVD3 440 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 KANSL3Q9P2N6 904 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 MCM8Q9UJA3 840 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 GJD2Q9UKL4 321 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 SLC25A27O95847 323 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 INHBAP08476 426 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 F7P08709 466 aaPredicted RBP10.91□□□□□ -0.66
TOP3A-209ENST00000580095 VDRP11473 427 aa10.91□□□□□ -0.66
TOP3A-209ENST00000580095 LCP1P13796 627 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms