RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 AFPP02771 609 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 THP07101 528 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 PRKAR1AP10644 381 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 RPL13P26373 211 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 PDIA3P30101 505 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 PTGS2P35354 604 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 TRIM23P36406 574 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 FNTAP49354 379 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 IL2P60568 153 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 VAMP2P63027 116 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 CSNK2BP67870 215 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 TUBA4AP68366 448 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 TFAP4Q01664 338 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 C17orf67Q0P5P2 114 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 CUL1Q13616 776 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 CYLC2Q14093 348 aaPredicted RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 PTPAQ15257 358 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 SMU1Q2TAY7 513 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 FLYWCH1Q4VC44 716 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 RNASEH2BQ5TBB1 312 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 NAIF1Q69YI7 327 aaPredicted RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 LRIG3Q6UXM1 1119 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 NCCRP1Q6ZVX7 275 aaPredicted RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 MTDHQ86UE4 582 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 GRAMD2AQ8IUY3 354 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 C12orf56Q8IXR9 622 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 OXR1Q8N573 874 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 SPATA20Q8TB22 786 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 CACTINQ8WUQ7 758 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 CALML4Q96GE6 196 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 C7orf34Q96L11 122 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 REXO4Q9GZR2 422 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 CARD9Q9H257 536 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 HAUS4Q9H6D7 363 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 EHD3Q9NZN3 535 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 KIF17Q9P2E2 1029 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 CPSF3Q9UKF6 684 aaKnown RBP6.87□□□□□ -1.31
COPS3-216ENST00000579716 PCDHGA1Q9Y5H4 931 aa6.87□□□□□ -1.31
COPS3-216ENST00000579716 CCDC151A5D8V7 595 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 OR6C74A6NCV1 312 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 NCF1BA6NI72 391 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 GOLGA6L10A6NI86 522 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 ENO4A6NNW6 628 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 NCF1CA8MVU1 366 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 TMEM232C9JQI7 657 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 E7EVH7 732 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 PDLIM1O00151 329 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 GTPBP1O00178 669 aaKnown RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 O00370 1275 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 KPNA5O15131 536 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 PGRMC2O15173 223 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 TEX28O15482 410 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 ZW10O43264 779 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 PROM1O43490 865 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 SLC25A17O43808 307 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 SUSD5O60279 629 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 CIDEAO60543 219 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 CRTAPO75718 401 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 RB1P06400 928 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 NFKBIAP25963 317 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 AKT1P31749 480 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 IGFALSP35858 605 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 THPOP40225 353 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 YWHAZP63104 245 aaKnown RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 SUMO1P63165 101 aaKnown RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 RNASELQ05823 741 aaKnown RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 GRIK3Q13003 919 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 STIM1Q13586 685 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 EFR3AQ14156 821 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 BTG3Q14201 252 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 HABP2Q14520 560 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 ZNF460Q14592 562 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 PFKFB3Q16875 520 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 Q3ZCU0 254 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 ZACNQ401N2 412 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 TRIM61Q5EBN2 209 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 RBM20Q5T481 1227 aaKnown RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 NDUFAF5Q5TEU4 345 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 DIEXFQ68CQ4 756 aaKnown RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 ADALQ6DHV7 355 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 TMEM132EQ6IEE7 984 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 ARHGAP36Q6ZRI8 547 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 CACNA2D4Q7Z3S7 1137 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 NLRX1Q86UT6 975 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 CCDC105Q8IYK2 499 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 DNAAF3Q8N9W5 541 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 KIF18AQ8NI77 898 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 NPLOC4Q8TAT6 608 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 SH3RF3Q8TEJ3 882 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 CREB3L4Q8TEY5 395 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 CYB5D2Q8WUJ1 264 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 KAT2BQ92831 832 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 ZUFSPQ96AP4 578 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 DACT3Q96B18 629 aaPredicted RBP6.86□□□□□ -1.31
COPS3-216ENST00000579716 FAM149B1Q96BN6 582 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 ZNF653Q96CK0 615 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 GBP5Q96PP8 586 aa6.86□□□□□ -1.31
COPS3-216ENST00000579716 MNTQ99583 582 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms