RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 CGB2Q6NT52 195 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SCYL2Q6P3W7 929 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ADGRD1Q6QNK2 874 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ALKAL1Q6UXT8 129 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PNMA8AQ86V59 439 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CDKL3Q8IVW4 592 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TAB3Q8N5C8 712 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PQLC3Q8N755 202 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PLD5Q8N7P1 536 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C12orf29Q8N999 325 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CCDC63Q8NA47 563 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 OR6B3Q8NGW1 331 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FBF1Q8TES7 1133 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAM172AQ8WUF8 416 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.857e-8■■□□□ 13.1
CDK5RAP3-208ENST00000578525 C18orf25Q96B23 403 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAF2Q96CS3 445 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZNF560Q96MR9 790 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PAFAH2Q99487 392 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 WDR83Q9BRX9 315 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZNF670Q9BS34 389 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CXCL16Q9H2A7 254 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CYLDQ9NQC7 956 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KLC4Q9NSK0 619 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ABCF3Q9NUQ8 709 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NRCAMQ92823 1304 aa9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PDCD11Q14690 1871 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MBLAC1A4D2B0 266 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DCAF8L1A6NGE4 600 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 A6NJR5 290 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 A8MXQ7 604 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DYNC1LI2O43237 492 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TYROBPO43914 113 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GABBR2O75899 941 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RECQL4O94761 1208 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 UBOX5O94941 541 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZWINTO95229 277 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZBED1O96006 694 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ALADP13716 330 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZFXP17010 805 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CA4P22748 312 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PNPLA4P41247 253 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MAGEA6P43360 314 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ACADSBP45954 432 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RPL34P49207 117 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PSEN2P49810 448 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BCAR1P56945 870 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TMEM62Q0P6H9 643 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MFSD10Q14728 455 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PDK4Q16654 411 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CA9Q16790 459 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HHATQ5VTY9 493 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C4orf22Q6V702 233 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C3orf62Q6ZUJ4 267 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC26A9Q7LBE3 791 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ARCQ7LC44 396 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZC3H18Q86VM9 953 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C4orf33Q8N1A6 199 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CRYBG2Q8N1P7 616 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GBP7Q8N8V2 638 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MZB1Q8WU39 189 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DCAKDQ8WVC6 231 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ALKBH8Q96BT7 664 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MRRFQ96E11 262 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CYTH2Q99418 400 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 OSMRQ99650 979 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PAIP2Q9BPZ3 127 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SNX25Q9H3E2 840 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KIF9Q9HAQ2 790 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 USP29Q9HBJ7 922 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PNPLA8Q9NP80 782 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CHMP2BQ9UQN3 213 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
CDK5RAP3-208ENST00000578525 A0A1W2PPM1 405 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HAS3O00219 553 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PIRO00625 290 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KCNN4O15554 427 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ADCY6O43306 1168 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TOMM70O94826 608 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KCNE1P15382 129 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 IL4RP24394 825 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CYP2F1P24903 491 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RBL1P28749 1068 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ADORA2BP29275 332 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RPA3P35244 121 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ELK3P41970 407 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TAF6P49848 677 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HDAC4P56524 1084 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NCALDP61601 193 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 YWHAZP63104 245 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CCDC15Q0P6D6 951 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC1A5Q15758 541 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SOWAHAQ2M3V2 549 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SV2CQ496J9 727 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAM133BQ5BKY9 247 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 XKR4Q5GH76 650 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GLRA4Q5JXX5 417 aa9.72□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FBXO47Q5MNV8 452 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms