RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 MARSP56192 900 aaKnown RBP24.23■■□□□ 1.47
VAPA-205ENST00000578314 STX17P56962 302 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 FBXO43Q4G163 708 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 UBR7Q8N806 425 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 JAKMIP2Q96AA8 810 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 EPC1Q9H2F5 836 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 CYLDQ9NQC7 956 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 USP3Q9Y6I4 520 aa24.23■■□□□ 1.47
VAPA-205ENST00000578314 CHURC1-FNTBB4DL54 471 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 CYP26A1O43174 497 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 ATG13O75143 517 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 CYP17A1P05093 508 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 YWHAEP62258 255 aaKnown RBP24.22■■□□□ 1.47
VAPA-205ENST00000578314 DHCR24Q15392 516 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 CAMK4Q16566 473 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 GAB4Q2WGN9 574 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 TRIM59Q8IWR1 403 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 ANKRD52Q8NB46 1076 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 LMO3Q8TAP4 145 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 OTUB2Q96DC9 234 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 OSER1Q9NX31 292 aa24.22■■□□□ 1.47
VAPA-205ENST00000578314 DMXL1Q9Y485 3027 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 OTOGLQ3ZCN5 2332 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 TBX18O95935 607 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 OPRD1P41143 372 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 CETN1Q12798 172 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 LRMPQ12912 555 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 PKN3Q6P5Z2 889 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 KLHDC10Q6PID8 442 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 RHBDF2Q6PJF5 856 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 CCDC186Q7Z3E2 898 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 ZNF276Q8N554 614 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 RUBCNQ92622 972 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 EZH1Q92800 747 aaPredicted RBP24.21■■□□□ 1.47
VAPA-205ENST00000578314 HINFPQ9BQA5 517 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 KLF16Q9BXK1 252 aaPredicted RBP24.21■■□□□ 1.47
VAPA-205ENST00000578314 SRRTQ9BXP5 876 aaKnown RBP24.21■■□□□ 1.47
VAPA-205ENST00000578314 NACA2Q9H009 215 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 NMUR1Q9HB89 426 aa24.21■■□□□ 1.47
VAPA-205ENST00000578314 RNF40O75150 1001 aa24.2■■□□□ 1.46
VAPA-205ENST00000578314 ATP5C1P36542 298 aaKnown RBP24.2■■□□□ 1.46
VAPA-205ENST00000578314 ANP32AP39687 249 aaKnown RBP24.2■■□□□ 1.46
VAPA-205ENST00000578314 PSEN1P49768 467 aa24.2■■□□□ 1.46
VAPA-205ENST00000578314 NT5C1BQ96P26 610 aa24.2■■□□□ 1.46
VAPA-205ENST00000578314 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.2■■□□□ 1.46
VAPA-205ENST00000578314 KIAA1257Q9ULG3 409 aa24.2■■□□□ 1.46
VAPA-205ENST00000578314 SH3BP1Q9Y3L3 701 aa24.2■■□□□ 1.46
VAPA-205ENST00000578314 DCHS1Q96JQ0 3298 aa24.2■■□□□ 1.46
VAPA-205ENST00000578314 GPR179Q6PRD1 2367 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 A0A1W2PQH9 124 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 SCAMP3O14828 347 aaKnown RBP24.19■■□□□ 1.46
VAPA-205ENST00000578314 FGFR1OPO95684 399 aaKnown RBP24.19■■□□□ 1.46
VAPA-205ENST00000578314 DMWDQ09019 674 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 KCNH2Q12809 1159 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 RAB41Q5JT25 222 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 SCD5Q86SK9 330 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 TTC30AQ86WT1 665 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 CLIC5Q9NZA1 410 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 RWDD2AQ9UIY3 292 aa24.19■■□□□ 1.46
VAPA-205ENST00000578314 GREM1O60565 184 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 ADH1CP00326 375 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 VDRP11473 427 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 RARGP13631 454 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 ID4P47928 161 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 SLC8A3P57103 927 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 SGO2Q562F6 1265 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 CLEC17AQ6ZS10 378 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 HTR3DQ70Z44 454 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 PIGZQ86VD9 579 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 LONP2Q86WA8 852 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 KIAA2013Q8IYS2 634 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 EHBP1Q8NDI1 1231 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 CCDC26Q8TAB7 109 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 WBP2Q969T9 261 aa24.18■■□□□ 1.46
VAPA-205ENST00000578314 HELZP42694 1942 aaKnown RBP24.18■■□□□ 1.46
VAPA-205ENST00000578314 CNR2P34972 360 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 EIF2DP41214 584 aaKnown RBP24.17■■□□□ 1.46
VAPA-205ENST00000578314 FNTBP49356 437 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 BBS7Q8IWZ6 715 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 DCLK2Q8N568 766 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 MED15Q96RN5 788 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 DNMT3LQ9UJW3 386 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 NAGPAQ9UK23 515 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 TSPAN16Q9UKR8 245 aa24.17■■□□□ 1.46
VAPA-205ENST00000578314 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.17■■□□□ 1.46
VAPA-205ENST00000578314 A0A0A0MRY4 1105 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 K7EQS6 105 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 AFPP02771 609 aaKnown RBP24.16■■□□□ 1.46
VAPA-205ENST00000578314 PAEPP09466 180 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 CCDC192P0DO97 292 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 ADH5P11766 374 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 CD19P15391 556 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 HOXC13P31276 330 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 PLA2G4AP47712 749 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 GOLGA7BQ2TAP0 167 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 LY6G5CQ5SRR4 150 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 TADA2BQ86TJ2 420 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 PPM1KQ8N3J5 372 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 MLKLQ8NB16 471 aa24.16■■□□□ 1.46
VAPA-205ENST00000578314 CLSTN2Q9H4D0 955 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms