RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 PDGFRLQ15198 375 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 KLHDC7AQ5VTJ3 777 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 PM20D1Q6GTS8 502 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 DDX42Q86XP3 938 aaKnown RBP eCLIP24.32■■□□□ 1.48
LIMD2-204ENST00000578297 ZNF276Q8N554 614 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 SLC35F5Q8WV83 523 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 OSCP1Q8WVF1 389 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 NELL2Q99435 816 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 FOXQ1Q9C009 403 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 NMUR1Q9HB89 426 aa24.32■■□□□ 1.48
LIMD2-204ENST00000578297 AJAP1Q9UKB5 411 aaPredicted RBP24.32■■□□□ 1.48
LIMD2-204ENST00000578297 MRPS17Q9Y2R5 130 aaKnown RBP24.32■■□□□ 1.48
LIMD2-204ENST00000578297 M0QYV0 167 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 MED7O43513 233 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 GNA15P30679 374 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 KPNA1P52294 538 aaPredicted RBP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 COPB1P53618 953 aaKnown RBP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 RUNX3Q13761 415 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 MEA1Q16626 185 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 SKOR2Q2VWA4 1001 aaPredicted RBP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 ITPRIPL2Q3MIP1 535 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 TRIM68Q6AZZ1 485 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 C1orf228Q6PIY5 440 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 SCD5Q86SK9 330 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 TTC16Q8NEE8 873 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 SECISBP2LQ93073 1101 aaKnown RBP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 ZFRQ96KR1 1074 aaKnown RBP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 EBF3Q9H4W6 596 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 LRRC4Q9HBW1 653 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 LTB4R2Q9NPC1 389 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 HPS4Q9NQG7 708 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 DUS2Q9NX74 493 aaKnown RBP24.31■■□□□ 1.48
LIMD2-204ENST00000578297 SMPD4Q9NXE4 827 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 CLIC5Q9NZA1 410 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 NAGPAQ9UK23 515 aa24.31■■□□□ 1.48
LIMD2-204ENST00000578297 SYCE3A1L190 88 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 SMTNL1A8MU46 457 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 ZBED1O96006 694 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 CDK11BP21127 795 aaKnown RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 ATP5C1P36542 298 aaKnown RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 USP8P40818 1118 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 FKBP15Q5T1M5 1219 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 PMF1Q6P1K2 205 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 KLHDC10Q6PID8 442 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 RALGPS2Q86X27 583 aaPredicted RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 DHX40Q8IX18 779 aaKnown RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 ARHGAP18Q8N392 663 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 ZNF606Q8WXB4 792 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 FAM3CQ92520 227 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 PRRX2Q99811 253 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 LSM14BQ9BX40 385 aaKnown RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 ULBP1Q9BZM6 244 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 NACA2Q9H009 215 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 PLCB1Q9NQ66 1216 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 MTF2Q9Y483 593 aaPredicted RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 ARIH1Q9Y4X5 557 aaPredicted RBP24.3■■□□□ 1.48
LIMD2-204ENST00000578297 WDFY4Q6ZS81 3184 aa24.3■■□□□ 1.48
LIMD2-204ENST00000578297 FAM170BA6NMN3 283 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 TBX18O95935 607 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 RALAP11233 206 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 RARGP13631 454 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 IFNAR2P48551 515 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 ZNF165P49910 485 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 ADIGQ0VDE8 80 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 UBXN2BQ14CS0 331 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 TADA2BQ86TJ2 420 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 SCML4Q8N228 414 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 TTC8Q8TAM2 541 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 ATP2A3Q93084 1043 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 HSFY1Q96LI6 401 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 CDK5RAP1Q96SZ6 601 aaKnown RBP24.29■■□□□ 1.48
LIMD2-204ENST00000578297 NAA15Q9BXJ9 866 aaKnown RBP24.29■■□□□ 1.48
LIMD2-204ENST00000578297 ACP6Q9NPH0 428 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 DLGAP2Q9P1A6 1054 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 CFAP97Q9P2B7 532 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 RAPGEFL1Q9UHV5 662 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 WNT6Q9Y6F9 365 aa24.29■■□□□ 1.48
LIMD2-204ENST00000578297 SPECC1L-ADORA2AF8WAN1 911 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 FOXN3O00409 490 aaPredicted RBP24.28■■□□□ 1.48
LIMD2-204ENST00000578297 THAP12O43422 761 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 DCNP07585 359 aaKnown RBP24.28■■□□□ 1.48
LIMD2-204ENST00000578297 ARSAP15289 507 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 UCHL3P15374 230 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 TARSP26639 723 aaKnown RBP24.28■■□□□ 1.48
LIMD2-204ENST00000578297 CTHP32929 405 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 GPD2P43304 727 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 SOX9P48436 509 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 EML3Q32P44 896 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 APTXQ7Z2E3 356 aaKnown RBP24.28■■□□□ 1.48
LIMD2-204ENST00000578297 CCDC105Q8IYK2 499 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 ZNF687Q8N1G0 1237 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 SIX6OS1Q8N1H7 587 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 LINC00597Q9H2U6 94 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 CNGB3Q9NQW8 809 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 FHOD1Q9Y613 1164 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 F5P12259 2224 aa24.28■■□□□ 1.48
LIMD2-204ENST00000578297 E2F8A0AVK6 867 aa24.27■■□□□ 1.48
LIMD2-204ENST00000578297 OTOL1A6NHN0 477 aaPredicted RBP24.27■■□□□ 1.48
LIMD2-204ENST00000578297 LGALS16A8MUM7 142 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms