RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 V9GYQ6 96 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 TGFB1I1O43294 461 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 LGR5O75473 907 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 FDX1P10109 184 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SPP2Q13103 211 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLC10A5Q5PT55 438 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 PPHLN1Q8NEY8 458 aaKnown RBP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SHC3Q92529 594 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 GPATCH2LQ9NWQ4 482 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 CHKBQ9Y259 395 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 F8VP50 259 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SULT1E1P49888 294 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ATP13A4Q4VNC1 1196 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ALYREFQ86V81 257 aaKnown RBP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SNX32Q86XE0 403 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ALLCQ8N6M5 410 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 VPS50Q96JG6 964 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 NT5C1AQ9BXI3 368 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 FHDC1Q9C0D6 1143 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ARHGEF38Q9NXL2 777 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 TMCO1Q9UM00 188 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 SNX9Q9Y5X1 595 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 BANF1O75531 89 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 USP1O94782 785 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 PTGIRP43119 386 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 NR1H2P55055 460 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 RBP5P82980 135 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 LRRC8BQ6P9F7 803 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 KYAT3Q6YP21 454 aaKnown RBP13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 NOD1Q9Y239 953 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
PCDHGB3-201ENST00000576222 UMODL1Q5DID0 1318 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 WTIPA6NIX2 430 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 TIMM44O43615 452 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 OCM2P0CE71 109 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 OCMP0CE72 109 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 C21orf59P57076 290 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 DPYSL3Q14195 570 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 KDELC2Q7Z4H8 507 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 CDC26Q8NHZ8 85 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 FAM49BQ9NUQ9 324 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 KIF17Q9P2E2 1029 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 COG5Q9UP83 839 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 RIMS1Q86UR5 1692 aaKnown RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 SPDYE5A6NIY4 337 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ENTPD3O75355 529 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 KCNA2P16389 499 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 GLRA2P23416 452 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 NFIAQ12857 509 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 PPP1R15BQ5SWA1 713 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 METTL23Q86XA0 190 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 TNIP2Q8NFZ5 429 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZNF570Q96NI8 536 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 SIK2Q9H0K1 926 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 LRRC4CQ9HCJ2 640 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZDHHC18Q9NUE0 388 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLC17A7Q9P2U7 560 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 SAE1Q9UBE0 346 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ANKRD63C9JTQ0 380 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 RTN3O95197 1032 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 CALCAP01258 141 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 UQCRBP14927 111 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 GLRBP48167 497 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 C6orf10Q5SRN2 563 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 TSPAN17Q96FV3 270 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 NMUR2Q9GZQ4 415 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 FBXO40Q9UH90 709 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 TMEM59LQ9UK28 342 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 SAC3D1A6NKF1 404 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZNF23P17027 643 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 S100A5P33763 92 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 MGAT5Q09328 741 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 FOXD4Q12950 439 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 HYIQ5T013 277 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 C16orf46Q6P387 395 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ZDHHC24Q6UX98 284 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 STRA8Q7Z7C7 330 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 SLITRK1Q96PX8 696 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 ACAD9Q9H845 621 aa13.54□□□□□ -0.24
PCDHGB3-201ENST00000576222 A0A087WXM4 84 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 C1orf232A0A0U1RR37 186 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 HEATR9A2RTY3 570 aa13.53□□□□□ -0.24
PCDHGB3-201ENST00000576222 TRIM13O60858 407 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms