RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 ABL1P00519 1130 aa9□□□□□ -0.97
NUP88-211ENST00000575976 ZDHHC11BP0C7U3 371 aa9□□□□□ -0.97
NUP88-211ENST00000575976 ALADP13716 330 aa9□□□□□ -0.97
NUP88-211ENST00000575976 PPP3CCP48454 512 aa9□□□□□ -0.97
NUP88-211ENST00000575976 DAOAP59103 153 aa9□□□□□ -0.97
NUP88-211ENST00000575976 CENPCQ03188 943 aa9□□□□□ -0.97
NUP88-211ENST00000575976 PTP4A2Q12974 167 aa9□□□□□ -0.97
NUP88-211ENST00000575976 SMAD2Q15796 467 aaKnown RBP9□□□□□ -0.97
NUP88-211ENST00000575976 PUS10Q3MIT2 529 aaKnown RBP9□□□□□ -0.97
NUP88-211ENST00000575976 C2CD6Q53TS8 623 aa9□□□□□ -0.97
NUP88-211ENST00000575976 STXBP5Q5T5C0 1151 aa9□□□□□ -0.97
NUP88-211ENST00000575976 GPR158Q5T848 1215 aa9□□□□□ -0.97
NUP88-211ENST00000575976 OR6B2Q6IFH4 312 aa9□□□□□ -0.97
NUP88-211ENST00000575976 ACAD10Q6JQN1 1059 aa9□□□□□ -0.97
NUP88-211ENST00000575976 CCDC186Q7Z3E2 898 aa9□□□□□ -0.97
NUP88-211ENST00000575976 MON1AQ86VX9 555 aa9□□□□□ -0.97
NUP88-211ENST00000575976 DNAAF5Q86Y56 855 aa9□□□□□ -0.97
NUP88-211ENST00000575976 SCML4Q8N228 414 aa9□□□□□ -0.97
NUP88-211ENST00000575976 PDZD8Q8NEN9 1154 aa9□□□□□ -0.97
NUP88-211ENST00000575976 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
NUP88-211ENST00000575976 OVCA2Q8WZ82 227 aa9□□□□□ -0.97
NUP88-211ENST00000575976 MRPS31Q92665 395 aaKnown RBP9□□□□□ -0.97
NUP88-211ENST00000575976 C18orf8Q96DM3 657 aa9□□□□□ -0.97
NUP88-211ENST00000575976 MCRS1Q96EZ8 462 aa9□□□□□ -0.97
NUP88-211ENST00000575976 GCNAQ96QF7 691 aa9□□□□□ -0.97
NUP88-211ENST00000575976 MYADMQ96S97 322 aa9□□□□□ -0.97
NUP88-211ENST00000575976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9□□□□□ -0.97
NUP88-211ENST00000575976 TLR8Q9NR97 1041 aaKnown RBP9□□□□□ -0.97
NUP88-211ENST00000575976 OSER1Q9NX31 292 aa9□□□□□ -0.97
NUP88-211ENST00000575976 TRPM5Q9NZQ8 1165 aa9□□□□□ -0.97
NUP88-211ENST00000575976 ADAMTS1Q9UHI8 967 aa9□□□□□ -0.97
NUP88-211ENST00000575976 C2orf16Q68DN1 1984 aa9□□□□□ -0.97
NUP88-211ENST00000575976 GREB1Q4ZG55 1949 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 MYH10P35580 1976 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 DOCK6Q96HP0 2047 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 NOTCH4Q99466 2003 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 A0A087X0T9 212 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 SSU72P8A0A1W2PR75 194 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 C2orf78A6NCI8 922 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 E7ENQ6 273 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 FBXO21O94952 628 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 FAM228BP0C875 321 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 MMP8P22894 467 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 SP100P23497 879 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 GBP2P32456 591 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 NSFP46459 744 aaKnown RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 GABRB2P47870 512 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 YWHAGP61981 247 aaKnown RBP eCLIP8.99□□□□□ -0.97
NUP88-211ENST00000575976 CDK17Q00537 523 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 FOXK2Q01167 660 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 GFPT1Q06210 699 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 ASTE1Q2TB18 679 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 ARHGAP15Q53QZ3 475 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 SNX30Q5VWJ9 437 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 TXNDC8Q6A555 127 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 MMS22LQ6ZRQ5 1243 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 HFE2Q6ZVN8 426 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 FAM183BPQ6ZVS7 135 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 PHLDB2Q86SQ0 1253 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 VPS36Q86VN1 386 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 PHF13Q86YI8 300 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 NPAS3Q8IXF0 933 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 MAB21L3Q8N8X9 362 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 IRGQQ8WZA9 623 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 FGF13Q92913 245 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 PIWIL1Q96J94 861 aaKnown RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 ZSWIM3Q96MP5 696 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 PANX2Q96RD6 677 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 C11orf70Q9BRQ4 267 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 PHF7Q9BWX1 381 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 SLC46A2Q9BY10 475 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 DEF6Q9H4E7 631 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 TASP1Q9H6P5 420 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 SYNCQ9H7C4 482 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 NHEJ1Q9H9Q4 299 aaPredicted RBP8.99□□□□□ -0.97
NUP88-211ENST00000575976 TRPC7Q9HCX4 862 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 C11orf16Q9NQ32 467 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 ADAM22Q9P0K1 906 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 NAGPAQ9UK23 515 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 NUDT5Q9UKK9 219 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 CDH7Q9ULB5 785 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 NCANO14594 1321 aa8.99□□□□□ -0.97
NUP88-211ENST00000575976 PATJQ8NI35 1801 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 FAM86C2PA6NEL3 165 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 GOLGA6L6A8MZA4 724 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 C2CD4DB7Z1M9 353 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 AKR1B10O60218 316 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 RTN2O75298 545 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 FTLP02792 175 aaPredicted RBP8.98□□□□□ -0.97
NUP88-211ENST00000575976 FYNP06241 537 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 GZMAP12544 262 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 RARGP13631 454 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 FECHP22830 423 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 PSEN1P49768 467 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 GSDMDP57764 484 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 SNX16P57768 344 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 SLC6A3Q01959 620 aa8.98□□□□□ -0.97
NUP88-211ENST00000575976 ZNF268Q14587 947 aaPredicted RBP8.98□□□□□ -0.97
NUP88-211ENST00000575976 TAF5Q15542 800 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms