RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 MAPRE1Q15691 268 aaKnown RBP17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 GRAMD4Q6IC98 578 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 HS2ST1Q7LGA3 356 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZNF605Q86T29 641 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 BBS7Q8IWZ6 715 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 CXorf38Q8TB03 319 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 NOC3LQ8WTT2 800 aaKnown RBP17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 OTUB2Q96DC9 234 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 MRGPRX1Q96LB2 322 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 SLITRK1Q96PX8 696 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 KIF2CQ99661 725 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 CD248Q9HCU0 757 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 SPHK2Q9NRA0 654 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 FNDC3AQ9Y2H6 1198 aaKnown RBP17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 STARD13Q9Y3M8 1113 aa17.33■□□□□ 0.36
CTDNEP1-211ENST00000575783 TK2O00142 265 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 CER1O95813 267 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 PLA2G2AP14555 144 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 ITPKBP27987 946 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 MATKP42679 507 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 CAMK2BQ13554 666 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 HLA-BQ31612 363 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 PDCD7Q8N8D1 485 aaKnown RBP17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 KBTBD7Q8WVZ9 684 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 CALML4Q96GE6 196 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 TOE1Q96GM8 510 aaKnown RBP17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 PCED1BQ96HM7 432 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 GPR174Q9BXC1 333 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 DNAJC17Q9NVM6 304 aaKnown RBP17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 RBAKQ9NYW8 714 aaPredicted RBP17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 SIX4Q9UIU6 781 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 LIMCH1Q9UPQ0 1083 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 CFAP46Q8IYW2 2715 aa17.32■□□□□ 0.36
CTDNEP1-211ENST00000575783 GOLGA8IPA6NC78 632 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 GOLGA8JA6NMD2 632 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 WASH3PC4AMC7 463 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 COCHO43405 550 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 NCAM1P13591 858 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 UBA7P41226 1012 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 MYO1EQ12965 1108 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 MDH1BQ5I0G3 518 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 DPH6Q7L8W6 267 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 BRSK2Q8IWQ3 736 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 BAHD1Q8TBE0 780 aaPredicted RBP17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 MYCBPAPQ8TBZ2 947 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 SCFD1Q8WVM8 642 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 DNASE2BQ8WZ79 361 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 HPDLQ96IR7 371 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 C8orf48Q96LL4 319 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 MTMR12Q9C0I1 747 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 CHORDC1Q9UHD1 332 aaPredicted RBP17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 TCHHQ07283 1943 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 PLXND1Q9Y4D7 1925 aa17.31■□□□□ 0.36
CTDNEP1-211ENST00000575783 MYH11P35749 1972 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 CYSRT1A8MQ03 144 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 PRRT4C9JH25 899 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 ATXN7O15265 892 aaPredicted RBP17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 BCAT2O15382 392 aaPredicted RBP17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 DKK1O94907 266 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 TMEM191BP0C7N4 346 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZNF883P0CG24 379 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 IRF1P10914 325 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 BNC1Q01954 994 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 KCNA1Q09470 495 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 IL27RAQ6UWB1 636 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 RASSF8Q8NHQ8 419 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZFRQ96KR1 1074 aaKnown RBP17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 MMS19Q96T76 1030 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 GABRG3Q99928 467 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 ST6GALNAC4Q9H4F1 302 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 PDE11AQ9HCR9 933 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 BTBD3Q9Y2F9 522 aa17.3■□□□□ 0.36
CTDNEP1-211ENST00000575783 ANAPC1Q9H1A4 1944 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 NEDD8-MDP1E9PL57 170 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 FLRT2O43155 660 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 YWHAQP27348 245 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 SUZ12Q15022 739 aaKnown RBP17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 HECTD3Q5T447 861 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 DCAF12L1Q5VU92 463 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 RAD54LQ92698 747 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 FBXO32Q969P5 355 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 WBP2Q969T9 261 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 XPO6Q96QU8 1125 aaKnown RBP17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 WSB2Q9NYS7 404 aaPredicted RBP17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 RAI2Q9Y5P3 530 aa17.29■□□□□ 0.36
CTDNEP1-211ENST00000575783 ZNF462Q96JM2 2506 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 A0A1B0GVT2 93 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 HLA-EP13747 358 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 WARSP23381 471 aaKnown RBP17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 DHRS13Q6UX07 377 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 DBX2Q6ZNG2 339 aa17.28■□□□□ 0.36
CTDNEP1-211ENST00000575783 LIMS2Q7Z4I7 341 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms