RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 FOXP1Q9H334 677 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ARL8BQ9NVJ2 186 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RIC8BQ9NVN3 520 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ARMCX3Q9UH62 379 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 VPS4AQ9UN37 437 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SOX13Q9UN79 622 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 AP3M1Q9Y2T2 418 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ECM29Q5VYK3 1845 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 NRKQ7Z2Y5 1582 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SMCO2A6NFE2 343 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 KLRF2D3W0D1 207 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 E7EWF7 191 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PSMD12O00232 456 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CCRL2O00421 344 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TGDSO95455 350 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ITGBL1O95965 494 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SERPING1P05155 500 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RPA1P27694 616 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 FOXN2P32314 431 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CIITAP33076 1130 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 IL13P35225 146 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC1A4P43007 532 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PTPN9P43378 593 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC26A2P50443 739 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TPTEP56180 551 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 MYBPC1Q00872 1141 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PTK2Q05397 1052 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SCRN3Q0VDG4 424 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ZNF846Q147U1 533 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 POU6F1Q14863 301 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SNX17Q15036 470 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TRIP10Q15642 601 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 OGFOD2Q6N063 350 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 LYPD8Q6UX82 237 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ZDHHC24Q6UX98 284 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 C15orf52Q6ZUT6 534 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 G2E3Q7L622 706 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 EPM2AIP1Q7L775 607 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 NOP9Q86U38 636 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CDR2LQ86X02 465 aaPredicted RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 FAM109AQ8N4B1 249 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RBM15BQ8NDT2 890 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 DPEP3Q9H4B8 488 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RAD21L1Q9H4I0 556 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SLA2Q9H6Q3 261 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PPCSQ9HAB8 311 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 CPNE5Q9HCH3 593 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 MAGEE1Q9HCI5 957 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SEC31BQ9NQW1 1179 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 MRPL39Q9NYK5 338 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 MBD2Q9UBB5 411 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TBK1Q9UHD2 729 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 KLF15Q9UIH9 416 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 DBR1Q9UK59 544 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PTBP2Q9UKA9 531 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 RIMKLBQ9ULI2 386 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 ANGEL1Q9UNK9 670 aaKnown RBP8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC8A2Q9UPR5 921 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 POLHQ9Y253 713 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PCDHGA8Q9Y5G5 932 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 PFASO15067 1338 aa8.26□□□□□ -1.09
TOM1L1-220ENST00000575333 TRPM3Q9HCF6 1732 aaPredicted RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 CRB1P82279 1406 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 KIAA0391O15091 583 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ASNA1O43681 348 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 MAN1A2O60476 641 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 TLR2O60603 784 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 KLHL41O60662 606 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 DXOO77932 396 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 S1PR4O95977 384 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 IL1BP01584 269 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 HLA-DRAP01903 254 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 C6orf222P0C671 652 aaPredicted RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ITGA6P23229 1130 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 HSD17B2P37059 387 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 NPEPPSP55786 919 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 MRPS15P82914 257 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 TMPRSS15P98073 1019 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 BTKQ06187 659 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 MAPK7Q13164 816 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 SP140Q13342 867 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 RRP1BQ14684 758 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ZNF568Q3ZCX4 644 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 IGSF11Q5DX21 431 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 SLC10A5Q5PT55 438 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ITPRIPL1Q6GPH6 555 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 GLRX5Q86SX6 157 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ZNF677Q86XU0 584 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 GALNT4Q8N4A0 578 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 SHCBP1Q8NEM2 672 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 ADCY4Q8NFM4 1077 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 PJA1Q8NG27 643 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 PSPC1Q8WXF1 523 aaKnown RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 HSPH1Q92598 858 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 DCUN1D1Q96GG9 259 aa8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
TOM1L1-220ENST00000575333 NLRP4Q96MN2 994 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms