RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 PIK3R2O00459 728 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 SCNN1AP37088 669 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 GSCP56915 257 aaPredicted RBP17.94■□□□□ 0.46
NUP88-210ENST00000574867 AAK1Q2M2I8 961 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 SCUBE3Q8IX30 993 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 GOLGA1Q92805 767 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 TRIM11Q96F44 468 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 VCPIP1Q96JH7 1222 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 C11orf70Q9BRQ4 267 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 POMKQ9H5K3 350 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 CLIC5Q9NZA1 410 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 WDR35Q9P2L0 1181 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 TJP2Q9UDY2 1190 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 NAGPAQ9UK23 515 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 ZNF840PA6NDX5 716 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 PFKLP17858 780 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 TUBP50607 506 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 OLFML1Q6UWY5 402 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 FAM183BPQ6ZVS7 135 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 TCEAL4Q96EI5 215 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 ISCUQ9H1K1 167 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 TAS2R14Q9NYV8 317 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 NENFQ9UMX5 172 aa17.94■□□□□ 0.46
NUP88-210ENST00000574867 ANAPC1Q9H1A4 1944 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 MOSPD3O75425 235 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 GLI1P08151 1106 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 CYLC1P35663 651 aaPredicted RBP17.93■□□□□ 0.46
NUP88-210ENST00000574867 YWHAGP61981 247 aaKnown RBP eCLIP17.93■□□□□ 0.46
NUP88-210ENST00000574867 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
NUP88-210ENST00000574867 PTP4A2Q12974 167 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 OR6B2Q6IFH4 312 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 ALKBH5Q6P6C2 394 aaKnown RBP17.93■□□□□ 0.46
NUP88-210ENST00000574867 GET4Q7L5D6 327 aaPredicted RBP17.93■□□□□ 0.46
NUP88-210ENST00000574867 BHLHA9Q7RTU4 235 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 XYLT1Q86Y38 959 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 MCOLN2Q8IZK6 566 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
NUP88-210ENST00000574867 CLEC4CQ8WTT0 213 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 CDK5RAP1Q96SZ6 601 aaKnown RBP17.93■□□□□ 0.46
NUP88-210ENST00000574867 ASNSD1Q9NWL6 643 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.46
NUP88-210ENST00000574867 EYSQ5T1H1 3165 aa17.93■□□□□ 0.46
NUP88-210ENST00000574867 A0A1W2PQH9 124 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 TMCO5BA8MYB1 307 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 CEBPBP17676 345 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 SLC6A3Q01959 620 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 ZNF268Q14587 947 aaPredicted RBP17.92■□□□□ 0.46
NUP88-210ENST00000574867 SMAD2Q15796 467 aaKnown RBP17.92■□□□□ 0.46
NUP88-210ENST00000574867 EFHC1Q5JVL4 640 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 PTCRAQ6ISU1 281 aaPredicted RBP17.92■□□□□ 0.46
NUP88-210ENST00000574867 TADA2BQ86TJ2 420 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 ITFG1Q8TB96 612 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 CHORDC1Q9UHD1 332 aaPredicted RBP17.92■□□□□ 0.46
NUP88-210ENST00000574867 YJEFN3A6XGL0 299 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 E7ENQ6 273 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 LTFP02788 710 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 FTLP02792 175 aaPredicted RBP17.92■□□□□ 0.46
NUP88-210ENST00000574867 MYBL1P10243 752 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 RALAP11233 206 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 CYP4F8P98187 520 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 TEAD2Q15562 447 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 CCDC122Q5T0U0 273 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 BEND5Q7L4P6 421 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 SLC26A9Q7LBE3 791 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 SCD5Q86SK9 330 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 TMEM139Q8IV31 216 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 NPAS3Q8IXF0 933 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 ZNF276Q8N554 614 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 MCRS1Q96EZ8 462 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 NMUR1Q9HB89 426 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 PRDM6Q9NQX0 595 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 ABCC13Q9NSE7 274 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 GDE1Q9NZC3 331 aa17.92■□□□□ 0.46
NUP88-210ENST00000574867 ZFP37Q9Y6Q3 630 aaPredicted RBP17.92■□□□□ 0.46
NUP88-210ENST00000574867 NRDCO43847 1150 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 HSF2BPO75031 334 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 ABL1P00519 1130 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 GJA1P17302 382 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 TFF2Q03403 129 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 C2CD6Q53TS8 623 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 HECTD3Q5T447 861 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 FAM102AQ5T9C2 384 aaPredicted RBP17.91■□□□□ 0.46
NUP88-210ENST00000574867 BTBD8Q5XKL5 378 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 C3orf20Q8ND61 904 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 ING5Q8WYH8 240 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 FAM149B1Q96BN6 582 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 SLITRK6Q9H5Y7 841 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 TASP1Q9H6P5 420 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 USTQ9Y2C2 406 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 FAM170AA1A519 330 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 SOWAHDA6NJG2 315 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 OAS1P00973 400 aaKnown RBP17.91■□□□□ 0.46
NUP88-210ENST00000574867 YWHAZP63104 245 aaKnown RBP17.91■□□□□ 0.46
NUP88-210ENST00000574867 CCDC173Q0VFZ6 552 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 GPR158Q5T848 1215 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 BSPRYQ5W0U4 402 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 OTOP3Q7RTS5 596 aa17.91■□□□□ 0.46
NUP88-210ENST00000574867 NDRG1Q92597 394 aaKnown RBP17.91■□□□□ 0.46
NUP88-210ENST00000574867 FGF13Q92913 245 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms