RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 IL4RP24394 825 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 STIP1P31948 543 aaKnown RBP14.65□□□□□ -0.06
VPS33B-208ENST00000574755 ATP5OP48047 213 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 BASP1P80723 227 aaKnown RBP14.65□□□□□ -0.06
VPS33B-208ENST00000574755 CA9Q16790 459 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 ANKRD20A8PQ5CZ79 823 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 CAPN12Q6ZSI9 719 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 GAD1Q99259 594 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
VPS33B-208ENST00000574755 HEY1Q9Y5J3 304 aa14.65□□□□□ -0.06
VPS33B-208ENST00000574755 EXOC1LA0A1B0GW35 172 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 APOL1O14791 398 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 XPO1O14980 1071 aaKnown RBP14.65□□□□□ -0.07
VPS33B-208ENST00000574755 CHRNA1P02708 482 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 SCNN1AP37088 669 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 RPL34P49207 117 aaKnown RBP14.65□□□□□ -0.07
VPS33B-208ENST00000574755 NRLP54845 237 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 CCDC142Q17RM4 750 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 ANKRD22Q5VYY1 191 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 WSCD1Q658N2 575 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 PIGZQ86VD9 579 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 SERINC5Q86VE9 423 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 PLD5Q8N7P1 536 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 NAT8LQ8N9F0 302 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 ATXN2LQ8WWM7 1075 aaKnown RBP14.65□□□□□ -0.07
VPS33B-208ENST00000574755 SENP6Q9GZR1 1112 aaPredicted RBP14.65□□□□□ -0.07
VPS33B-208ENST00000574755 VPS37BQ9H9H4 285 aa14.65□□□□□ -0.07
VPS33B-208ENST00000574755 CEP350Q5VT06 3117 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 ALOX15BO15296 676 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 SEPT4O43236 478 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 THP07101 528 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 TM4SF4P48230 202 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 ATXN1P54253 815 aaKnown RBP14.64□□□□□ -0.07
VPS33B-208ENST00000574755 ARL4CP56559 192 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 BCAR1P56945 870 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 GAD2Q05329 585 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 ADIGQ0VDE8 80 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 ARCQ7LC44 396 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 FUKQ8N0W3 1084 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 GSTCDQ8NEC7 633 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 LPPQ93052 612 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 FAM149B1Q96BN6 582 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 HNRNPABQ99729 332 aaKnown RBP14.64□□□□□ -0.07
VPS33B-208ENST00000574755 ZNF670Q9BS34 389 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 UPF3AQ9H1J1 476 aaKnown RBP14.64□□□□□ -0.07
VPS33B-208ENST00000574755 NAALADL1Q9UQQ1 740 aa14.64□□□□□ -0.07
VPS33B-208ENST00000574755 FOXO6A8MYZ6 492 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 ANKRD65E5RJM6 399 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CLDN5O00501 218 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 BANF1O75531 89 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 PTPN1P18031 435 aaKnown RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 TGM2P21980 687 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 IGFBP6P24592 240 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 AFF1P51825 1210 aaKnown RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 TRIM32Q13049 653 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 EFHC1Q5JVL4 640 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 ANKMY2Q8IV38 441 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CCDC13Q8IYE1 715 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CYP4X1Q8N118 509 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 PQLC3Q8N755 202 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 PCDH19Q8TAB3 1148 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CHMP6Q96FZ7 201 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 PRMT1Q99873 361 aaKnown RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 C11orf84Q9BUA3 381 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 DUSP16Q9BY84 665 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 DHX35Q9H5Z1 703 aaKnown RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 XPNPEP3Q9NQH7 507 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CHST12Q9NRB3 414 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 LGALS13Q9UHV8 139 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 TMEM120BA0PK00 339 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 MAP3K6O95382 1288 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 ASGR1P07306 291 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CREB1P16220 341 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 NPR3P17342 541 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CLCNKBP51801 687 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 PRKCZQ05513 592 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 SLC9A4Q6AI14 798 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CPLX4Q7Z7G2 160 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 VSIG1Q86XK7 387 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 CENPIQ92674 756 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 SENP8Q96LD8 212 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 MED10Q9BTT4 135 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 DDX43Q9NXZ2 648 aaKnown RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 XPO7Q9UIA9 1087 aaKnown RBP14.63□□□□□ -0.07
VPS33B-208ENST00000574755 AP4E1Q9UPM8 1137 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 FAM169AQ9Y6X4 670 aa14.63□□□□□ -0.07
VPS33B-208ENST00000574755 TCRBV7S3A2A0A539 114 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 ARL5CA6NH57 179 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 GABRDO14764 452 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 GPR182O15218 404 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 BEST1O76090 585 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 TMEM63AO94886 807 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 THPOP40225 353 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 IFNAR2P48551 515 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 TMED2Q15363 201 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 DPYSL2Q16555 572 aa14.62□□□□□ -0.07
VPS33B-208ENST00000574755 QPCTQ16769 361 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms