RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CASQ2O14958 399 aaPredicted RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 RIMBP2O15034 1052 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 DENRO43583 198 aaKnown RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 ITM2AO43736 263 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 SNNO75324 88 aaPredicted RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 CRTAMO95727 393 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 MPP3Q13368 585 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 TUBB3Q13509 450 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 OGFRL1Q5TC84 451 aaPredicted RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 ENOSF1Q7L5Y1 443 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 RNF168Q8IYW5 571 aaPredicted RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 IRGQQ8WZA9 623 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 ZNF778Q96MU6 729 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 FAM213AQ9BRX8 229 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 SERPINA10Q9UK55 444 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 SH3GLB1Q9Y371 365 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 A0A1B0GTW7 788 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 SIN3BO75182 1162 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 RFPL1O75677 317 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 SNRPAP09012 282 aaKnown RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 VARSP26640 1264 aaKnown RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 WASHC5Q12768 1159 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 PPP1R14CQ8TAE6 165 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 ACTRT2Q8TDY3 377 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 MFSD14AQ96MC6 490 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 SIKE1Q9BRV8 207 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 XAB2Q9HCS7 855 aaKnown RBP14.96□□□□□ -0.01
SMG6-215ENST00000574501 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 DNAJC16Q9Y2G8 782 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 AP4B1Q9Y6B7 739 aa14.96□□□□□ -0.01
SMG6-215ENST00000574501 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 ARHGAP10A1A4S6 786 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 PEX1O43933 1283 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 ZNF189O75820 626 aaPredicted RBP14.95□□□□□ -0.02
SMG6-215ENST00000574501 KRT37O76014 449 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 ITGAXP20702 1163 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 KRT81Q14533 505 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 FAM98CQ17RN3 349 aaKnown RBP14.95□□□□□ -0.02
SMG6-215ENST00000574501 WDR44Q5JSH3 913 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 C6orf52Q5T4I8 152 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 SLC39A4Q6P5W5 647 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 AMIGO2Q86SJ2 522 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 ZNF410Q86VK4 478 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 FBXW8Q8N3Y1 598 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 ZFRQ96KR1 1074 aaKnown RBP14.95□□□□□ -0.02
SMG6-215ENST00000574501 XPNPEP1Q9NQW7 623 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 APOBEC2Q9Y235 224 aaKnown RBP14.95□□□□□ -0.02
SMG6-215ENST00000574501 TEX264Q9Y6I9 313 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 DKC1O60832 514 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMG6-215ENST00000574501 BPGMP07738 259 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 CD48P09326 243 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 SOX10P56693 466 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 DPYSL3Q14195 570 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 PLA2G4FQ68DD2 849 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 B3GNT9Q6UX72 402 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 FRMD7Q6ZUT3 714 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 POLNQ7Z5Q5 900 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 NDUFAF2Q8N183 169 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 CERS5Q8N5B7 392 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 VCPIP1Q96JH7 1222 aa14.95□□□□□ -0.02
SMG6-215ENST00000574501 TMEM221A6NGB7 291 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 GNPATO15228 680 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 TNFAIP8O95379 198 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 P4HBP07237 508 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 NCF2P19878 526 aaPredicted RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 ACO1P21399 889 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 ATP2B4P23634 1241 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 HDAC4P56524 1084 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 RPL26P61254 145 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 MROH9Q5TGP6 573 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 VWA5B1Q5TIE3 1220 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 WDR75Q8IWA0 830 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 PQLC1Q8N2U9 271 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 TMEM161BQ8NDZ6 487 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 CSRNP1Q96S65 589 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 YIPF2Q9BWQ6 316 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 IFT122Q9HBG6 1241 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 C3orf70A6NLC5 250 aaPredicted RBP14.94□□□□□ -0.02
SMG6-215ENST00000574501 KLHL2O95198 593 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 HLA-DRAP01903 254 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 TNNI1P19237 187 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 WNT7BP56706 349 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 LPIN1Q14693 890 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 PDK1Q15118 436 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 SLC44A4Q53GD3 710 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 C16orf46Q6P387 395 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
SMG6-215ENST00000574501 NUP93Q8N1F7 819 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms