RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ZIK1Q3SY52 487 aaPredicted RBP5.71□□□□□ -1.5
CDC27-215ENST00000573550 ARHGAP40Q5TG30 622 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 STRIP1Q5VSL9 837 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 RNF220Q5VTB9 566 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 ICE2Q659A1 982 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 GAS2L3Q86XJ1 694 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 ZNF280BQ86YH2 543 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 DNAJC10Q8IXB1 793 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 GCC1Q96CN9 775 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 BBC3Q96PG8 261 aaPredicted RBP5.71□□□□□ -1.5
CDC27-215ENST00000573550 PRAM1Q96QH2 718 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 EHD3Q9NZN3 535 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 DKK3Q9UBP4 350 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 NDRG4Q9ULP0 352 aaKnown RBP5.71□□□□□ -1.5
CDC27-215ENST00000573550 SHOC2Q9UQ13 582 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 ENTPD2Q9Y5L3 495 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 OVOS2A0A0J9YW53 1432 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 OVOS2Q6IE36 1432 aa5.71□□□□□ -1.5
CDC27-215ENST00000573550 FRMPD2Q68DX3 1309 aaPredicted RBP5.71□□□□□ -1.5
CDC27-215ENST00000573550 ARHGEF10O15013 1369 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 KIAA0232Q92628 1395 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 CACNA1FO60840 1977 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 TMEM233B4DJY2 109 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 MYO1CO00159 1063 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 FRAT2O75474 233 aaPredicted RBP5.7□□□□□ -1.5
CDC27-215ENST00000573550 C1QL1O75973 258 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 URI1O94763 535 aaPredicted RBP5.7□□□□□ -1.5
CDC27-215ENST00000573550 CSF1RP07333 972 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 ZNF853P0CG23 659 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 CYP2C9P11712 490 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 RHCEP18577 417 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 RHDQ02161 417 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 EIF2B5Q13144 721 aaKnown RBP5.7□□□□□ -1.5
CDC27-215ENST00000573550 TBCCQ15814 346 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 RGS7BPQ6MZT1 257 aaPredicted RBP5.7□□□□□ -1.5
CDC27-215ENST00000573550 ADGRG3Q86Y34 549 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 LRTOMTQ8WZ04 291 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 SUCLG2Q96I99 432 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 KLK15Q9H2R5 256 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 CXorf36Q9H7Y0 433 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 KIAA1586Q9HCI6 787 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 SEMA4GQ9NTN9 838 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 CHMP5Q9NZZ3 219 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 SLC17A6Q9P2U8 582 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 CPNE7Q9UBL6 633 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 TPCN1Q9ULQ1 816 aa5.7□□□□□ -1.5
CDC27-215ENST00000573550 RRP7AQ9Y3A4 280 aaKnown RBP5.7□□□□□ -1.5
CDC27-215ENST00000573550 FAM208AQ9UK61 1670 aaKnown RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 IBTKQ9P2D0 1353 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 ISM1B1AKI9 464 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 hCG_1984214I3L0E3 225 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 ORC4O43929 436 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 MARCH6O60337 910 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 TBC1D4O60343 1298 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 XRCC6P12956 609 aaKnown RBP eCLIP5.69□□□□□ -1.5
CDC27-215ENST00000573550 MYF5P13349 255 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 BRAFP15056 766 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 LRPAP1P30533 357 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 DDIT3P35638 169 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 TNNT2P45379 298 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 SUMO3P55854 103 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 FAM193AP78312 1265 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 MYO1EQ12965 1108 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 RAB32Q13637 225 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 POLD3Q15054 466 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 KIAA0753Q2KHM9 967 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 TEDDM1Q5T9Z0 273 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 FBXO42Q6P3S6 717 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 MAVSQ7Z434 540 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 DTX2Q86UW9 622 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 MICU3Q86XE3 530 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 ITPRIPQ8IWB1 547 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 ATRIPQ8WXE1 791 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 ATG4AQ8WYN0 398 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 TIFAQ96CG3 184 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 UROC1Q96N76 676 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 TIMP4Q99727 224 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 ZNF518BQ9C0D4 1074 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 MS4A7Q9GZW8 240 aaPredicted RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 IL17RBQ9NRM6 502 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 CHPF2Q9P2E5 772 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 MRPS17Q9Y2R5 130 aaKnown RBP5.69□□□□□ -1.5
CDC27-215ENST00000573550 TUBGCP6Q96RT7 1819 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 KIF13AQ9H1H9 1805 aa5.69□□□□□ -1.5
CDC27-215ENST00000573550 RTL1A6NKG5 1358 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 COL11A2P13942 1736 aaPredicted RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 FSD2A1L4K1 749 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 OVOL3O00110 214 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 GOLIM4O00461 696 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 ERBB2P04626 1255 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 NR2F6P10588 404 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 ZFXP17010 805 aaPredicted RBP5.68□□□□□ -1.5
CDC27-215ENST00000573550 ITPKBP27987 946 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 PEX2P28328 305 aa5.68□□□□□ -1.5
CDC27-215ENST00000573550 RIPK4P57078 832 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms