RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ADAMTSL1Q8N6G6 1762 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 RNF225M0QZC1 329 aaPredicted RBP10.52□□□□□ -0.72
SMG6-213ENST00000573166 SYN3O14994 580 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 PSTPIP1O43586 416 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 ATP2C2O75185 946 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 INHBAP08476 426 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 WEE1P30291 646 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 ATP5C1P36542 298 aaKnown RBP10.52□□□□□ -0.72
SMG6-213ENST00000573166 NOMO3P69849 1222 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 NR1H3Q13133 447 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 THOC5Q13769 683 aaKnown RBP10.52□□□□□ -0.72
SMG6-213ENST00000573166 GLE1Q53GS7 698 aaKnown RBP10.52□□□□□ -0.72
SMG6-213ENST00000573166 RNF187Q5TA31 235 aaPredicted RBP10.52□□□□□ -0.72
SMG6-213ENST00000573166 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 UNC45BQ8IWX7 931 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 GIMAP7Q8NHV1 300 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 BADQ92934 168 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 EXOC4Q96A65 974 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 RMDN1Q96DB5 314 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 ABCC13Q9NSE7 274 aa10.52□□□□□ -0.72
SMG6-213ENST00000573166 PHIPQ8WWQ0 1821 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 HDCP19113 662 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 TKTP29401 623 aaKnown RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 KCNJ1P48048 391 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 IFNAR2P48551 515 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 BYSLQ13895 437 aaKnown RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 GEN1Q17RS7 908 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 SKA2Q8WVK7 121 aaPredicted RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 TTC1Q99614 292 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 ERVK-5Q9HDB9 667 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 BFARQ9NZS9 450 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 PCDHB8Q9UN66 801 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 LAMA4Q16363 1823 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 ADGRA2Q96PE1 1338 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 O00370 1275 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 CA4P22748 312 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 NOS2P35228 1153 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 NDUFV1P49821 464 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 ARL4CP56559 192 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 SMARCB1Q12824 385 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 INTS6LQ5JSJ4 861 aaKnown RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 PPP2R2DQ66LE6 453 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 TTC19Q6DKK2 380 aaPredicted RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 PRSS55Q6UWB4 352 aaPredicted RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMG6-213ENST00000573166 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 LNX1Q8TBB1 728 aaPredicted RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 MYCBPAPQ8TBZ2 947 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 B3GALT6Q96L58 329 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 CFAP57Q96MR6 1250 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 ACBD6Q9BR61 282 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 PLCD4Q9BRC7 762 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 C11orf84Q9BUA3 381 aaPredicted RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 DYRK4Q9NR20 520 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 STYXL1Q9Y6J8 313 aa10.52□□□□□ -0.73
SMG6-213ENST00000573166 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
SMG6-213ENST00000573166 FER1L6Q2WGJ9 1857 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 TUBGCP6Q96RT7 1819 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 MYBPHLA2RUH7 354 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 PPEF2O14830 753 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 TADA3O75528 432 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 NOL4O94818 638 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 VNN1O95497 513 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 KCNE1P15382 129 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 PBX1P40424 430 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 ENPEPQ07075 957 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 PDK2Q15119 407 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 HECTD3Q5T447 861 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 LCLAT1Q6UWP7 414 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 VSTM1Q6UX27 236 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 FAM183BPQ6ZVS7 135 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 ASIC4Q96FT7 647 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 CFAP36Q96G28 342 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 SAYSD1Q9NPB0 183 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 CNTN3Q9P232 1028 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 MRFAP1Q9Y605 127 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 SCAMP3O14828 347 aaKnown RBP10.51□□□□□ -0.73
SMG6-213ENST00000573166 TRUB2O95900 331 aaKnown RBP10.51□□□□□ -0.73
SMG6-213ENST00000573166 LMO2P25791 158 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 PMLP29590 882 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 ETFBP38117 255 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 RAD23BP54727 409 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 SLMAPQ14BN4 828 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 PCGF5Q86SE9 256 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 FAM76AQ8TAV0 307 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 DIS3LQ8TF46 1054 aaKnown RBP10.51□□□□□ -0.73
SMG6-213ENST00000573166 COG1Q8WTW3 980 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 TCF25Q9BQ70 676 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 UPF3AQ9H1J1 476 aaKnown RBP10.51□□□□□ -0.73
SMG6-213ENST00000573166 RAB6BQ9NRW1 208 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 WDR70Q9NW82 654 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 APRTP07741 180 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 GATMP50440 423 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 CUL1Q13616 776 aa10.51□□□□□ -0.73
SMG6-213ENST00000573166 C15orf59Q2T9L4 293 aaPredicted RBP10.51□□□□□ -0.73
SMG6-213ENST00000573166 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms