RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 DPP3Q9NY33 737 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 KANSL3Q9P2N6 904 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 ANK1P16157 1881 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 IQANK1A0A1B0GTG1 560 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 BCAR1P56945 870 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 CLNKQ7Z7G1 428 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 ACOT1Q86TX2 421 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 PPM1NQ8N819 430 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 FAM172AQ8WUF8 416 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 SLC44A1Q8WWI5 657 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 DCPSQ96C86 337 aaKnown RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 KIF12Q96FN5 646 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 NFKBIZQ9BYH8 718 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 LOC102724159A0A0B4J2E5 919 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 C2orf71A6NGG8 1288 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 SMAPO00193 183 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 C2CD2LO14523 706 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 ATP5HO75947 161 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 ZBED1O96006 694 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 TFE3P19532 575 aaPredicted RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 IREB2P48200 963 aaKnown RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 YWHAZP63104 245 aaKnown RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 INCA1Q0VD86 236 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 PWP2Q15269 919 aaKnown RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 FAM47CQ5HY64 1035 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 TLDC1Q6P9B6 456 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 PQLC3Q8N755 202 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 PCDH19Q8TAB3 1148 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 CCDC110Q8TBZ0 833 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 ALKBH8Q96BT7 664 aaKnown RBP11.68□□□□□ -0.54
RPAIN-212ENST00000573126 ACAP3Q96P50 834 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 TSSK1BQ9BXA7 367 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 MIS12Q9H081 205 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 VPS11Q9H270 941 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 SNX9Q9Y5X1 595 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 A0A0G2JMZ2 1700 aa11.68□□□□□ -0.54
RPAIN-212ENST00000573126 CXorf49A8MYA2 514 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 PPEF2O14830 753 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 GM2AP17900 193 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 BGNP21810 368 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 RBP5P82980 135 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ARHGAP1Q07960 439 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 FAM187BQ17R55 369 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 SLC45A4Q5BKX6 768 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 OLFML1Q6UWY5 402 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 CDHR3Q6ZTQ4 885 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ARMCX2Q7L311 632 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 TTC30AQ86WT1 665 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ERO1BQ86YB8 467 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 MAP7D3Q8IWC1 876 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 FAM13CQ8NE31 585 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 APOPT1Q96IL0 206 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 MRPL45Q9BRJ2 306 aaKnown RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 SNRNP25Q9BV90 132 aaKnown RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 MAGEB5Q9BZ81 275 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 GBA2Q9HCG7 927 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 PCDH18Q9HCL0 1135 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 FBXO6Q9NRD1 293 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 GEMIN8Q9NWZ8 242 aaKnown RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ZC3H7BQ9UGR2 993 aaKnown RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 TRIM49D1C9J1S8 452 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 APOL1O14791 398 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 CHADO15335 359 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 HCRTO43612 131 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 TSPAN1O60635 241 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 SDC4P31431 198 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ETV4P43268 484 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 LONP2Q86WA8 852 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 TRIM55Q9BYV6 548 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 PAK5Q9P286 719 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 NKX1-2Q9UD57 310 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-212ENST00000573126 ITGA11Q9UKX5 1188 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 KAT6AQ92794 2004 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 DNAH12Q6ZR08 3092 aa11.67□□□□□ -0.54
RPAIN-212ENST00000573126 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-212ENST00000573126 CFAP69A5D8W1 941 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 UGT1A9O60656 530 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 CYP2C8P10632 490 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 CLNS1AP54105 237 aaKnown RBP11.66□□□□□ -0.54
RPAIN-212ENST00000573126 BMPR2Q13873 1038 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 PARP6Q2NL67 630 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 GLRA4Q5JXX5 417 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 SH2D5Q6ZV89 423 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 CAND1Q86VP6 1230 aaKnown RBP11.66□□□□□ -0.54
RPAIN-212ENST00000573126 PPP1R13LQ8WUF5 828 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 INPP5DQ92835 1189 aa11.66□□□□□ -0.54
RPAIN-212ENST00000573126 PRR11Q96HE9 360 aaPredicted RBP11.66□□□□□ -0.54
RPAIN-212ENST00000573126 RSRC1Q96IZ7 334 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms