RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 RNF225M0QZC1 329 aaPredicted RBP17.01■□□□□ 0.31
NDE1-205ENST00000572756 O00370 1275 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 NFATC1O95644 943 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 VDRP11473 427 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 TDGF1P13385 188 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
NDE1-205ENST00000572756 ZNF132P52740 706 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 GOLGA7BQ2TAP0 167 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 PKDCCQ504Y2 493 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
NDE1-205ENST00000572756 FSTL4Q6MZW2 842 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 TMEM270Q6UE05 265 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 Q6ZS52 159 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 RBM43Q6ZSC3 357 aaKnown RBP17.01■□□□□ 0.31
NDE1-205ENST00000572756 RRAGAQ7L523 313 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 SCD5Q86SK9 330 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 PIGZQ86VD9 579 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 SYNPOQ8N3V7 929 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 TFAP2BQ92481 460 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 NELL1Q92832 810 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 KIAA1257Q9ULG3 409 aa17.01■□□□□ 0.31
NDE1-205ENST00000572756 A0A1W2PQH9 124 aa17■□□□□ 0.31
NDE1-205ENST00000572756 TULP2O00295 520 aa17■□□□□ 0.31
NDE1-205ENST00000572756 SLC9A3R1O14745 358 aaPredicted RBP17■□□□□ 0.31
NDE1-205ENST00000572756 XPO1O14980 1071 aaKnown RBP17■□□□□ 0.31
NDE1-205ENST00000572756 TBX18O95935 607 aa17■□□□□ 0.31
NDE1-205ENST00000572756 CYP17A1P05093 508 aa17■□□□□ 0.31
NDE1-205ENST00000572756 BCAT1P54687 386 aa17■□□□□ 0.31
NDE1-205ENST00000572756 AMPD2Q01433 879 aa17■□□□□ 0.31
NDE1-205ENST00000572756 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
NDE1-205ENST00000572756 PDE4CQ08493 712 aa17■□□□□ 0.31
NDE1-205ENST00000572756 KLHDC10Q6PID8 442 aa17■□□□□ 0.31
NDE1-205ENST00000572756 ADGRG2Q8IZP9 1017 aa17■□□□□ 0.31
NDE1-205ENST00000572756 SPEM1Q8N4L4 309 aa17■□□□□ 0.31
NDE1-205ENST00000572756 ZNF276Q8N554 614 aa17■□□□□ 0.31
NDE1-205ENST00000572756 WBP2Q969T9 261 aa17■□□□□ 0.31
NDE1-205ENST00000572756 ZSWIM1Q9BR11 485 aa17■□□□□ 0.31
NDE1-205ENST00000572756 KLF16Q9BXK1 252 aaPredicted RBP17■□□□□ 0.31
NDE1-205ENST00000572756 THAP9Q9H5L6 903 aa17■□□□□ 0.31
NDE1-205ENST00000572756 FBRSL1Q9HCM7 1045 aaKnown RBP17■□□□□ 0.31
NDE1-205ENST00000572756 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17■□□□□ 0.31
NDE1-205ENST00000572756 CNTN6Q9UQ52 1028 aa17■□□□□ 0.31
NDE1-205ENST00000572756 PCDHB4Q9Y5E5 795 aa17■□□□□ 0.31
NDE1-205ENST00000572756 FAM186AA6NE01 2351 aa17■□□□□ 0.31
NDE1-205ENST00000572756 SCAMP3O14828 347 aaKnown RBP16.99■□□□□ 0.31
NDE1-205ENST00000572756 GREM1O60565 184 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 CD19P15391 556 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 PSEN1P49768 467 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 GALK1P51570 392 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 BST2Q10589 180 aaKnown RBP16.99■□□□□ 0.31
NDE1-205ENST00000572756 GRSF1Q12849 480 aaKnown RBP eCLIP16.99■□□□□ 0.31
NDE1-205ENST00000572756 NR1H3Q13133 447 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 CT47A1Q5JQC4 288 aaPredicted RBP16.99■□□□□ 0.31
NDE1-205ENST00000572756 PM20D1Q6GTS8 502 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 LCLAT1Q6UWP7 414 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 BHLHA9Q7RTU4 235 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 RBBP8NLQ8NC74 664 aaPredicted RBP16.99■□□□□ 0.31
NDE1-205ENST00000572756 P2RY13Q9BPV8 354 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 CLIC5Q9NZA1 410 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 TBC1D14Q9P2M4 693 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 DACH1Q9UI36 760 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 R4GN57 208 aa16.99■□□□□ 0.31
NDE1-205ENST00000572756 GTPBP10A4D1E9 387 aaKnown RBP16.98■□□□□ 0.31
NDE1-205ENST00000572756 PRR23AA6NEV1 266 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 PAPSS2O95340 614 aaPredicted RBP16.98■□□□□ 0.31
NDE1-205ENST00000572756 EGFP01133 1207 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 SETSIPP0DME0 302 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 RARGP13631 454 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 ATP5C1P36542 298 aaKnown RBP16.98■□□□□ 0.31
NDE1-205ENST00000572756 OPRD1P41143 372 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 PLA2G4AP47712 749 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 CCR3P51677 355 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 SLC8A3P57103 927 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 SATB1Q01826 763 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 DHCR24Q15392 516 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 CNGA2Q16280 664 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 TRIM65Q6PJ69 517 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 RHBDF2Q6PJF5 856 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 TSSK4Q6SA08 328 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 ASCL5Q7RTU5 278 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 ZBTB44Q8NCP5 570 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
NDE1-205ENST00000572756 OTUB2Q96DC9 234 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 CRACR2AQ9BSW2 395 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 C2orf42Q9NWW7 574 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 HESX1Q9UBX0 185 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 NAGPAQ9UK23 515 aa16.98■□□□□ 0.31
NDE1-205ENST00000572756 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.98■□□□□ 0.31
NDE1-205ENST00000572756 CALCAP01258 141 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 SLC9A1P19634 815 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 DRD1P21728 446 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 BRD2P25440 801 aaKnown RBP16.97■□□□□ 0.31
NDE1-205ENST00000572756 MTIF2P46199 727 aaKnown RBP16.97■□□□□ 0.31
NDE1-205ENST00000572756 TKTL1P51854 596 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 STILQ15468 1287 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 TPD52L1Q16890 204 aaPredicted RBP16.97■□□□□ 0.31
NDE1-205ENST00000572756 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
NDE1-205ENST00000572756 ZC3H14Q6PJT7 736 aaKnown RBP16.97■□□□□ 0.31
NDE1-205ENST00000572756 GBP6Q6ZN66 633 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms