RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 CDH7Q9ULB5 785 aa10.1□□□□□ -0.79
CIITA-208ENST00000572665 ANHXE9PGG2 379 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 F8W810 466 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 H0YCG3 227 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 H7C4K7 107 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 N4BP1O75113 896 aaKnown RBP10.09□□□□□ -0.79
CIITA-208ENST00000572665 FAM153BP0C7A2 387 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 MYBP10242 640 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 SCP2P22307 547 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 U2AF2P26368 475 aaKnown RBP eCLIP10.09□□□□□ -0.79
CIITA-208ENST00000572665 OR1D2P34982 312 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 PEX3P56589 373 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 SQSTM1Q13501 440 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 PPP2R5DQ14738 602 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 IFI16Q16666 785 aaKnown RBP10.09□□□□□ -0.79
CIITA-208ENST00000572665 CLEC16AQ2KHT3 1053 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 ZNF568Q3ZCX4 644 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 RILPL1Q5EBL4 403 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 PRSS36Q5K4E3 855 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 POMZP3Q6PJE2 187 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 GRASPQ7Z6J2 395 aaPredicted RBP10.09□□□□□ -0.79
CIITA-208ENST00000572665 TRIM59Q8IWR1 403 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 IGSF22Q8N9C0 903 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 NETO1Q8TDF5 533 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 CLSTN3Q9BQT9 956 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 PAAF1Q9BRP4 392 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 TRIT1Q9H3H1 467 aaKnown RBP10.09□□□□□ -0.79
CIITA-208ENST00000572665 TBC1D17Q9HA65 648 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 KMT5AQ9NQR1 393 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 ARHGEF4Q9NR80 690 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 GPATCH2Q9NW75 528 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 KCND2Q9NZV8 630 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 MTRRQ9UBK8 725 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 ZC3H7BQ9UGR2 993 aaKnown RBP10.09□□□□□ -0.79
CIITA-208ENST00000572665 CA14Q9ULX7 337 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 SIT1Q9Y3P8 196 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 BACE2Q9Y5Z0 518 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 NUMBLQ9Y6R0 609 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 VWA8A3KMH1 1905 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 MYH15Q9Y2K3 1946 aa10.09□□□□□ -0.79
CIITA-208ENST00000572665 MIA3Q5JRA6 1907 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 PRR23AA6NEV1 266 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 SYN3O14994 580 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 TBX1O43435 398 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 NARSO43776 548 aaKnown RBP10.08□□□□□ -0.8
CIITA-208ENST00000572665 TGFB1P01137 390 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 LRG1P02750 347 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 CAPNS1P04632 268 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 MCF2P10911 925 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 RPL9P32969 192 aaKnown RBP10.08□□□□□ -0.8
CIITA-208ENST00000572665 MAGEA9P43362 315 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 CLCNKBP51801 687 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 PPP2R2AP63151 447 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 PRKCQQ04759 706 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 HTR4Q13639 388 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 NAB2Q15742 525 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 KYAT1Q16773 422 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 UPP1Q16831 310 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 LONRF2Q1L5Z9 754 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 PABPC1LQ4VXU2 614 aaKnown RBP10.08□□□□□ -0.8
CIITA-208ENST00000572665 RSPO2Q6UXX9 243 aaPredicted RBP10.08□□□□□ -0.8
CIITA-208ENST00000572665 ELMOD1Q8N336 334 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 SLC7A14Q8TBB6 771 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 RSAD2Q8WXG1 361 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 CDK5RAP3Q96JB5 506 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 HSPA12BQ96MM6 686 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 ACAP3Q96P50 834 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
CIITA-208ENST00000572665 MAFFQ9ULX9 164 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 SF3B6Q9Y3B4 125 aaKnown RBP10.08□□□□□ -0.8
CIITA-208ENST00000572665 NUB1Q9Y5A7 615 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 CDY1Q9Y6F8 540 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
CIITA-208ENST00000572665 SMIM28A0A1B0GU29 152 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 H0Y8X5 98 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 H3BS24 57 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 PRRG1O14668 218 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 ZNF197O14709 1029 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 NCAM2O15394 837 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 CCL16O15467 120 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 SLC26A4O43511 780 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 XPOTO43592 962 aaKnown RBP10.07□□□□□ -0.8
CIITA-208ENST00000572665 PI15O43692 258 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 HIP1RO75146 1068 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 PTPN2P17706 415 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 ABCD1P33897 745 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 CTSKP43235 329 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 NPTX2P47972 431 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 ST3GAL1Q11201 340 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 GLRA4Q5JXX5 417 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 NT5DC1Q5TFE4 455 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 EEF1DP3Q658K8 133 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 MCTP1Q6DN14 999 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 MPZL3Q6UWV2 235 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 FRMD5Q7Z6J6 570 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 THAP5Q7Z6K1 395 aa10.07□□□□□ -0.8
CIITA-208ENST00000572665 TSPYL5Q86VY4 417 aaPredicted RBP10.07□□□□□ -0.8
CIITA-208ENST00000572665 ZNF655Q8N720 491 aaPredicted RBP10.07□□□□□ -0.8
CIITA-208ENST00000572665 APPL2Q8NEU8 664 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms