RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 P4HA1P13674 534 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 PSMC2P35998 433 aaKnown RBP19.16■□□□□ 0.66
CHD3-214ENST00000572579 TUBP50607 506 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 PMS1P54277 932 aaKnown RBP19.16■□□□□ 0.66
CHD3-214ENST00000572579 TMEM92Q6UXU6 159 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 TMEM25Q86YD3 366 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 ETFBKMTQ8IXQ9 262 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 PDZD8Q8NEN9 1154 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 ENGASEQ8NFI3 743 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 KLF16Q9BXK1 252 aaPredicted RBP19.16■□□□□ 0.66
CHD3-214ENST00000572579 MMRN2Q9H8L6 949 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 ZDHHC4Q9NPG8 344 aa19.16■□□□□ 0.66
CHD3-214ENST00000572579 CDV3Q9UKY7 258 aaKnown RBP19.16■□□□□ 0.66
CHD3-214ENST00000572579 SLC9A3R1O14745 358 aaPredicted RBP19.15■□□□□ 0.66
CHD3-214ENST00000572579 CYP26A1O43174 497 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 CLSTN1O94985 981 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 EPN2O95208 641 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 APBB3O95704 486 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 PRCPP42785 496 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 KIR2DL1P43626 348 aaPredicted RBP19.15■□□□□ 0.66
CHD3-214ENST00000572579 ENPEPQ07075 957 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 PLA2G2CQ5R387 149 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 SCD5Q86SK9 330 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 CYFIP2Q96F07 1278 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 CYP3A43Q9HB55 503 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 TMEM8AQ9HCN3 771 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 ATP8B3O60423 1300 aa19.15■□□□□ 0.66
CHD3-214ENST00000572579 SGK1O00141 431 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 SLC30A4O14863 429 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 TLR5O60602 858 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 ADAM23O75077 832 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 KIF20AO95235 890 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 KAT7O95251 611 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 CCDC192P0DO97 292 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 ADH5P11766 374 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 CD58P19256 250 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 EDRF1Q3B7T1 1238 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 RASSF3Q86WH2 238 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 ALLCQ8N6M5 410 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 NAT16Q8N8M0 369 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 IL17RCQ8NAC3 791 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 TATDN2Q93075 761 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 EXOC4Q96A65 974 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 JAKMIP2Q96AA8 810 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 LOXL4Q96JB6 756 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 PNKPQ96T60 521 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 ARID3AQ99856 593 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 DUSP9Q99956 384 aaKnown RBP19.14■□□□□ 0.65
CHD3-214ENST00000572579 RTKNQ9BST9 563 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 NT5C1AQ9BXI3 368 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 NIF3L1Q9GZT8 377 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 CYLDQ9NQC7 956 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 TBC1D14Q9P2M4 693 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 NUDT5Q9UKK9 219 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 SCML2Q9UQR0 700 aa19.14■□□□□ 0.65
CHD3-214ENST00000572579 MDM4O15151 490 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 FAM200BP0CF97 657 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 IRF1P10914 325 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 BCKDHBP21953 392 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 RPL13P26373 211 aaKnown RBP19.13■□□□□ 0.65
CHD3-214ENST00000572579 EIF2DP41214 584 aaKnown RBP19.13■□□□□ 0.65
CHD3-214ENST00000572579 CRY1Q16526 586 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 PPP1R26Q5T8A7 1209 aaPredicted RBP19.13■□□□□ 0.65
CHD3-214ENST00000572579 DDX42Q86XP3 938 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHD3-214ENST00000572579 ZC3H3Q8IXZ2 948 aaKnown RBP19.13■□□□□ 0.65
CHD3-214ENST00000572579 MDGA1Q8NFP4 955 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 SPATA20Q8TB22 786 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 NETO1Q8TDF5 533 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 ACDQ96AP0 544 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 TPSD1Q9BZJ3 242 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 MMP17Q9ULZ9 603 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 ATP6V1DQ9Y5K8 247 aa19.13■□□□□ 0.65
CHD3-214ENST00000572579 A0A1W2PQH9 124 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 TM4SF5O14894 197 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 ZNF806P0C7X5 589 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 KRT13P13646 458 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 ACO1P21399 889 aaKnown RBP19.12■□□□□ 0.65
CHD3-214ENST00000572579 SDHBP21912 280 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 GTF2H1P32780 548 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 TIE1P35590 1138 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 DGKEP52429 567 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 KIF11P52732 1056 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 MRPS21P82921 87 aaKnown RBP19.12■□□□□ 0.65
CHD3-214ENST00000572579 KDSRQ06136 332 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 CBWD6Q4V339 395 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 ZNF394Q53GI3 561 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 CBWD3Q5JTY5 395 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 CBWD5Q5RIA9 395 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 KRT39Q6A163 491 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 ANKRD40Q6AI12 368 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 TCEAL6Q6IPX3 200 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 HTR3DQ70Z44 454 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 MIB1Q86YT6 1006 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 FRMD1Q8N878 549 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 TXNDC5Q8NBS9 432 aaKnown RBP19.12■□□□□ 0.65
CHD3-214ENST00000572579 TSTD1Q8NFU3 115 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 TCEAL3Q969E4 200 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 CCDC47Q96A33 483 aaKnown RBP19.12■□□□□ 0.65
CHD3-214ENST00000572579 FBXO44Q9H4M3 255 aa19.12■□□□□ 0.65
CHD3-214ENST00000572579 ARHGEF4Q9NR80 690 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms