RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
SMG6-211ENST00000572369 VPS16Q9H269 839 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 FBXO44Q9H4M3 255 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 COMMD8Q9NX08 183 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 TAB2Q9NYJ8 693 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 WNT16Q9UBV4 365 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 KIAA1257Q9ULG3 409 aa8.22□□□□□ -1.09
SMG6-211ENST00000572369 MYO18BQ8IUG5 2567 aa8.21□□□□□ -1.09
SMG6-211ENST00000572369 KIF26AQ9ULI4 1882 aaPredicted RBP8.21□□□□□ -1.09
SMG6-211ENST00000572369 GTPBP10A4D1E9 387 aaKnown RBP8.21□□□□□ -1.1
SMG6-211ENST00000572369 C2orf78A6NCI8 922 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 BECN2A8MW95 431 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 TADA3O75528 432 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 KRT38O76015 456 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 BEST1O76090 585 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 PAEPP09466 180 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 FCARP24071 287 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 BCAT1P54687 386 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 KLHL40Q2TBA0 621 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 ARHGAP29Q52LW3 1261 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 FKBP15Q5T1M5 1219 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 PHLDB3Q6NSJ2 640 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 POTEHQ6S545 545 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 ENOSF1Q7L5Y1 443 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 TMEM150AQ86TG1 271 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 MON1AQ86VX9 555 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 AOPEPQ8N6M6 819 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 ARL14EPQ8N8R7 260 aaPredicted RBP8.21□□□□□ -1.1
SMG6-211ENST00000572369 SCAMP5Q8TAC9 235 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 LMO3Q8TAP4 145 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 BPIFB1Q8TDL5 484 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 OVCA2Q8WZ82 227 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 SHDQ96IW2 340 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.1
SMG6-211ENST00000572369 CYP2S1Q96SQ9 504 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 TTLL2Q9BWV7 592 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 DUSP16Q9BY84 665 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 KIF9Q9HAQ2 790 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 TRPV4Q9HBA0 871 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 CSNK1G1Q9HCP0 422 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 PARD6AQ9NPB6 346 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 ARHGEF3Q9NR81 526 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 SLC2A4RGQ9NR83 387 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 TLR8Q9NR97 1041 aaKnown RBP8.21□□□□□ -1.1
SMG6-211ENST00000572369 TDP1Q9NUW8 608 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 TMEM30AQ9NV96 361 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 FANCLQ9NW38 375 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 OBP2AQ9NY56 170 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 APEX2Q9UBZ4 518 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 CHORDC1Q9UHD1 332 aaPredicted RBP8.21□□□□□ -1.1
SMG6-211ENST00000572369 TSPAN16Q9UKR8 245 aa8.21□□□□□ -1.1
SMG6-211ENST00000572369 SYCE3A1L190 88 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 ZNF840PA6NDX5 716 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 EIF4E1BA6NMX2 242 aaKnown RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 SMTNL1A8MU46 457 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 M0QYV0 167 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 CHADO15335 359 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 THAP12O43422 761 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 MED7O43513 233 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 PRAMEF12O95522 483 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 MBL2P11226 248 aaPredicted RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 BRD2P25440 801 aaKnown RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 PON1P27169 355 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 KPNA1P52294 538 aaPredicted RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 TPM4P67936 248 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 PLCB2Q00722 1185 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 BST2Q10589 180 aaKnown RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 RAPGEF1Q13905 1077 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 UBXN2BQ14CS0 331 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 STILQ15468 1287 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 MLF2Q15773 248 aaPredicted RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 SLC44A4Q53GD3 710 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 ARHGAP17Q68EM7 881 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 GJB7Q6PEY0 223 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 TPRG1Q6ZUI0 275 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 ANKRD52Q8NB46 1076 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 ZMIZ2Q8NF64 920 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 TTC8Q8TAM2 541 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 UBA3Q8TBC4 463 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 DNASE1L2Q92874 299 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 USP13Q92995 863 aaPredicted RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 TMEM121BQ9BXQ6 578 aaPredicted RBP8.2□□□□□ -1.1
SMG6-211ENST00000572369 LRRC4Q9HBW1 653 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 PNPLA8Q9NP80 782 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 HEBP1Q9NRV9 189 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 CACNA2D2Q9NY47 1150 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 GMIPQ9P107 970 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 DNAJC12Q9UKB3 198 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 MIA3Q5JRA6 1907 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 AKAP13Q12802 2813 aa8.2□□□□□ -1.1
SMG6-211ENST00000572369 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.19□□□□□ -1.1
SMG6-211ENST00000572369 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
SMG6-211ENST00000572369 RNF225M0QZC1 329 aaPredicted RBP8.19□□□□□ -1.1
SMG6-211ENST00000572369 TNFRSF10BO14763 440 aa8.19□□□□□ -1.1
SMG6-211ENST00000572369 XPO1O14980 1071 aaKnown RBP8.19□□□□□ -1.1
SMG6-211ENST00000572369 CYP26A1O43174 497 aa8.19□□□□□ -1.1
SMG6-211ENST00000572369 SETSIPP0DME0 302 aa8.19□□□□□ -1.1
SMG6-211ENST00000572369 PFKLP17858 780 aa8.19□□□□□ -1.1
SMG6-211ENST00000572369 WEE1P30291 646 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms