RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 CLEC20AQ6ZU45 233 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 GPRIN1Q7Z2K8 1008 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 FMR1NBQ8N0W7 255 aaPredicted RBP18.32■□□□□ 0.52
LITAF-211ENST00000572255 CCDC150Q8NCX0 1101 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 CYFIP2Q96F07 1278 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 EEF2KMTQ96G04 330 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 NACA2Q9H009 215 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 RMND1Q9NWS8 449 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 SH3BP1Q9Y3L3 701 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 ANTXRLA6NF34 631 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 HHLA1C9JL84 531 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 TLR5O60602 858 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 CILPO75339 1184 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 EIF2DP41214 584 aaKnown RBP18.31■□□□□ 0.52
LITAF-211ENST00000572255 MESP2Q0VG99 397 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 BECN1Q14457 450 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 LY6G5CQ5SRR4 150 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 KRT39Q6A163 491 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 C12orf40Q86WS4 652 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 WHAMMQ8TF30 809 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 WBP2Q969T9 261 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 JAKMIP2Q96AA8 810 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 OTUB2Q96DC9 234 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 LOXL4Q96JB6 756 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 PNKPQ96T60 521 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 TLR8Q9NR97 1041 aaKnown RBP18.31■□□□□ 0.52
LITAF-211ENST00000572255 SPTBN2O15020 2390 aa18.31■□□□□ 0.52
LITAF-211ENST00000572255 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 CETN3O15182 167 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 IRF1P10914 325 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 EPB41P11171 864 aaKnown RBP18.3■□□□□ 0.52
LITAF-211ENST00000572255 PRCPP42785 496 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 MXI1P50539 228 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 SFTPA1Q8IWL2 248 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 BBS7Q8IWZ6 715 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 TSTD1Q8NFU3 115 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 SEMA4DQ92854 862 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 DUSP9Q99956 384 aaKnown RBP18.3■□□□□ 0.52
LITAF-211ENST00000572255 RTKNQ9BST9 563 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 ARRDC1-AS1Q9H2J1 176 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 ARHGEF4Q9NR80 690 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 EBF1Q9UH73 591 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 MMP17Q9ULZ9 603 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 SCML2Q9UQR0 700 aa18.3■□□□□ 0.52
LITAF-211ENST00000572255 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.29■□□□□ 0.52
LITAF-211ENST00000572255 CYP26A1O43174 497 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 STX10O60499 249 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 FOXD2O60548 495 aaPredicted RBP18.29■□□□□ 0.52
LITAF-211ENST00000572255 EPN2O95208 641 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 KAT7O95251 611 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 APODP05090 189 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 ACO1P21399 889 aaKnown RBP18.29■□□□□ 0.52
LITAF-211ENST00000572255 MRPS21P82921 87 aaKnown RBP18.29■□□□□ 0.52
LITAF-211ENST00000572255 GAD2Q05329 585 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 KDSRQ06136 332 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 ZNF658Q5TYW1 1059 aaPredicted RBP18.29■□□□□ 0.52
LITAF-211ENST00000572255 CCDC33Q8N5R6 958 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 FBXL13Q8NEE6 735 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 NETO1Q8TDF5 533 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 ZC3H10Q96K80 434 aaKnown RBP18.29■□□□□ 0.52
LITAF-211ENST00000572255 GSDMAQ96QA5 445 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 PNPLA8Q9NP80 782 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 CYLDQ9NQC7 956 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 PCDHA5Q9Y5H7 936 aa18.29■□□□□ 0.52
LITAF-211ENST00000572255 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.28■□□□□ 0.52
LITAF-211ENST00000572255 SMC2O95347 1197 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 TBX18O95935 607 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
LITAF-211ENST00000572255 GRIA2P42262 883 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 DGKEP52429 567 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 NUCB2P80303 420 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 PLK5Q496M5 336 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 ZNF394Q53GI3 561 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 COBLL1Q53SF7 1204 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 PPP1R26Q5T8A7 1209 aaPredicted RBP18.28■□□□□ 0.52
LITAF-211ENST00000572255 FAXDC2Q96IV6 333 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 TSG101Q99816 390 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 KLF16Q9BXK1 252 aaPredicted RBP18.28■□□□□ 0.52
LITAF-211ENST00000572255 NMUR1Q9HB89 426 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 SPHK2Q9NRA0 654 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 OSER1Q9NX31 292 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 RAB20Q9NX57 234 aa18.28■□□□□ 0.52
LITAF-211ENST00000572255 A0A0A0MRY4 1105 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 A0A1W2PQH9 124 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 DCDC2BA2VCK2 349 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 SLC30A4O14863 429 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 DCLK1O15075 740 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 HOXC11O43248 304 aaPredicted RBP18.27■□□□□ 0.52
LITAF-211ENST00000572255 GDF9O60383 454 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 ATP5C1P36542 298 aaKnown RBP18.27■□□□□ 0.52
LITAF-211ENST00000572255 TNFRSF4P43489 277 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 KIF11P52732 1056 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 SF3A2Q15428 464 aaKnown RBP18.27■□□□□ 0.52
LITAF-211ENST00000572255 CCDC6Q16204 474 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 BTBD8Q5XKL5 378 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 ANO7Q6IWH7 933 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 HTR3DQ70Z44 454 aa18.27■□□□□ 0.52
LITAF-211ENST00000572255 TMEM25Q86YD3 366 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms