RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SHC3Q92529 594 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 TMEM176AQ96HP8 235 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 GBP4Q96PP9 640 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 UCN2Q96RP3 112 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 TRMT61BQ9BVS5 477 aaKnown RBP9.18□□□□□ -0.94
SMG6-210ENST00000572205 DUSP16Q9BY84 665 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 SLITRK6Q9H5Y7 841 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 CCSER2Q9H7U1 834 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 KIF9Q9HAQ2 790 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 ACP6Q9NPH0 428 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 CYLDQ9NQC7 956 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 C2orf42Q9NWW7 574 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 TSPAN16Q9UKR8 245 aa9.18□□□□□ -0.94
SMG6-210ENST00000572205 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMG6-210ENST00000572205 R3HCC1Q9Y3T6 440 aaKnown RBP9.18□□□□□ -0.94
SMG6-210ENST00000572205 ATP8B3O60423 1300 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 KANSL1LA0AUZ9 987 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 ANTXRLA6NF34 631 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 SMAPO00193 183 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 DCNP07585 359 aaKnown RBP9.17□□□□□ -0.94
SMG6-210ENST00000572205 HOXB3P14651 431 aaPredicted RBP9.17□□□□□ -0.94
SMG6-210ENST00000572205 PFKLP17858 780 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 SLC9A1P19634 815 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 TBXAS1P24557 533 aaPredicted RBP9.17□□□□□ -0.94
SMG6-210ENST00000572205 PON1P27169 355 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 ANXA13P27216 316 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 HOXC13P31276 330 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 PFKPQ01813 784 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 NHLH1Q02575 133 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 CCINQ13939 588 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 ARHGAP29Q52LW3 1261 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 ARHGAP15Q53QZ3 475 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 PIGZQ86VD9 579 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 FLCNQ8NFG4 579 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 OLIG1Q8TAK6 271 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 ENOX1Q8TC92 643 aaKnown RBP9.17□□□□□ -0.94
SMG6-210ENST00000572205 LRRN4Q8WUT4 740 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 MRPS31Q92665 395 aaKnown RBP9.17□□□□□ -0.94
SMG6-210ENST00000572205 IRF7Q92985 503 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 CRACR2AQ9BSW2 395 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
SMG6-210ENST00000572205 OSBPL6Q9BZF3 934 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 CYTH4Q9UIA0 394 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 FBXL21Q9UKT6 434 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 SCML2Q9UQR0 700 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMG6-210ENST00000572205 PIAS3Q9Y6X2 628 aa9.17□□□□□ -0.94
SMG6-210ENST00000572205 SPAG17Q6Q759 2223 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 TRAV19A0A0A6YYK7 116 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 SPECC1L-ADORA2AF8WAN1 911 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 LEFTY2O00292 366 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 EPHB6O15197 1021 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 RTN3O95197 1032 aaPredicted RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 PAEPP09466 180 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 USP17L7P0C7H9 530 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PNMA6AP0CW24 399 aaPredicted RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 CCDC192P0DO97 292 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 CHRNB1P11230 501 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 YWHAQP27348 245 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 AVPR1AP37288 418 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PLA2G5P39877 138 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 MAN2A1Q16706 1144 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 GOLGA7BQ2TAP0 167 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 HSP90AA4PQ58FG1 418 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 CT47A1Q5JQC4 288 aaPredicted RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 CCDC183Q5T5S1 534 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PM20D1Q6GTS8 502 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PKN3Q6P5Z2 889 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 LCLAT1Q6UWP7 414 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 SUGP1Q8IWZ8 645 aaKnown RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 PPM1KQ8N3J5 372 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 ZNF276Q8N554 614 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 KIAA1958Q8N8K9 716 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 ANKRD52Q8NB46 1076 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 RBBP8NLQ8NC74 664 aaPredicted RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 SH3RF2Q8TEC5 729 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 SLC35F5Q8WV83 523 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 OSCP1Q8WVF1 389 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 NELL1Q92832 810 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 FBXO32Q969P5 355 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 GCNAQ96QF7 691 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 GANQ9H2C0 597 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 ALG2Q9H553 416 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 BRD9Q9H8M2 597 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 TRPC7Q9HCX4 862 aa9.16□□□□□ -0.94
SMG6-210ENST00000572205 PRMT8Q9NR22 394 aaPredicted RBP9.16□□□□□ -0.94
SMG6-210ENST00000572205 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMG6-210ENST00000572205 COMMD8Q9NX08 183 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms