RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ANKRD11Q6UB99 2663 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 SPEGQ15772 3267 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 MTMR11A4FU01 709 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 PMM2O15305 246 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 SOAT2O75908 522 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 PTPN1P18031 435 aaKnown RBP14.11□□□□□ -0.15
CCDC40-205ENST00000571028 PON1P27169 355 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 ALDH1A3P47895 512 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 KLK7P49862 253 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 UBXN1Q04323 297 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 DUSP4Q13115 394 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 GPR17Q13304 367 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 ARHGAP44Q17R89 818 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 ITPRIPL2Q3MIP1 535 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 RALGAPA1Q6GYQ0 2036 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 SPATA2LQ8IUW3 424 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-205ENST00000571028 CAMKK1Q8N5S9 505 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 ZC3H10Q96K80 434 aaKnown RBP14.11□□□□□ -0.15
CCDC40-205ENST00000571028 TWNKQ96RR1 684 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 MED10Q9BTT4 135 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 OXCT2Q9BYC2 517 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-205ENST00000571028 ATXN3LQ9H3M9 355 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 CRTAC1Q9NQ79 661 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 CISHQ9NSE2 258 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 PCDHB4Q9Y5E5 795 aa14.11□□□□□ -0.15
CCDC40-205ENST00000571028 CLDN5O00501 218 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 FGF19O95750 216 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 FAM163BP0C2L3 166 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 CEACAM1P13688 526 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 TBXAS1P24557 533 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-205ENST00000571028 USP8P40818 1118 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 RING1Q06587 406 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 TNK2Q07912 1038 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 KCNMA1Q12791 1236 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 MGAT5BQ3V5L5 792 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 PLK5Q496M5 336 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 FILIP1LQ4L180 1135 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 STXBP5Q5T5C0 1151 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 GPR158Q5T848 1215 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 SCN4BQ8IWT1 228 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 BPIFB1Q8TDL5 484 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 HEXIM2Q96MH2 286 aaKnown RBP14.1□□□□□ -0.15
CCDC40-205ENST00000571028 SCNM1Q9BWG6 230 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 ELOVL4Q9GZR5 314 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 TMEM9BQ9NQ34 198 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 FAM49BQ9NUQ9 324 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 OBP2AQ9NY56 170 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 PCDHB5Q9Y5E4 795 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 ZZEF1O43149 2961 aa14.1□□□□□ -0.15
CCDC40-205ENST00000571028 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
CCDC40-205ENST00000571028 LGALS16A8MUM7 142 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 CILPO75339 1184 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 VNN2O95498 520 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 CALCAP01258 141 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 KRT5P13647 590 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 ADORA2BP29275 332 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 GBP1P32455 592 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 GPR15P49685 360 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 MFAP3P55082 362 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 YWHAEP62258 255 aaKnown RBP14.09□□□□□ -0.15
CCDC40-205ENST00000571028 FANCCQ00597 558 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 AMPD2Q01433 879 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 SYCP1Q15431 976 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 SDHAF4Q5VUM1 108 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 SPATA18Q8TC71 538 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 EXOC4Q96A65 974 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 TNIP3Q96KP6 325 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-205ENST00000571028 GCNAQ96QF7 691 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 HHIPQ96QV1 700 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 NT5C1AQ9BXI3 368 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 FAM207AQ9NSI2 230 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-205ENST00000571028 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 ZFYVE26Q68DK2 2539 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 GREB1Q4ZG55 1949 aa14.09□□□□□ -0.15
CCDC40-205ENST00000571028 LNP1A1A4G5 178 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 KHNYNO15037 678 aaKnown RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 TEX33O43247 280 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 CCDC130P13994 396 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 CD19P15391 556 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 TRIM21P19474 475 aaKnown RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 CSRP1P21291 193 aaKnown RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 BDNFP23560 247 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 CYP2F1P24903 491 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 RAPGEF1Q13905 1077 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 KIAA1211LQ6NV74 962 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 PKN3Q6P5Z2 889 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 TMEM270Q6UE05 265 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 APTXQ7Z2E3 356 aaKnown RBP14.08□□□□□ -0.16
CCDC40-205ENST00000571028 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 UNC93AQ86WB7 457 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 TMC8Q8IU68 726 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 STKLD1Q8NE28 680 aa14.08□□□□□ -0.16
CCDC40-205ENST00000571028 WHAMMQ8TF30 809 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms