RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 C12orf29Q8N999 325 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 KIAA0895Q8NCT3 520 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 PARD3BQ8TEW8 1205 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 CEP295NLQ96MC4 621 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 NACA2Q9H009 215 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 DMAP1Q9NPF5 467 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 KMT2BQ9UMN6 2715 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 IGF2RP11717 2491 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ATP8B3O60423 1300 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 ATXN2Q99700 1313 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 PVALEFA0A1B0GWK0 134 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 PCNX2A6NKB5 2137 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 TNFRSF10BO14763 440 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 KLRC4O43908 158 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 TULP3O75386 442 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 ALDH1A2O94788 518 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 F13A1P00488 732 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 FAM163BP0C2L3 166 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 SPINK2P20155 84 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 ADORA2BP29275 332 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 GRIA2P42262 883 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 PTGER3P43115 390 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 KIR2DL1P43626 348 aaPredicted RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 MAPK8P45983 427 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 NDST1P52848 882 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 MAP3K7CLP57077 242 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 SNRPFP62306 86 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 DNM1Q05193 864 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 KMT5BQ4FZB7 885 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 EOGTQ5NDL2 527 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 SH3PXD2AQ5TCZ1 1133 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 BTBD8Q5XKL5 378 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 C12orf56Q8IXR9 622 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 CEP57L1Q8IYX8 460 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 PDZD8Q8NEN9 1154 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZMIZ2Q8NF64 920 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 SLC2A14Q8TDB8 520 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 BHMTQ93088 406 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 SMARCD1Q96GM5 515 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 PAGE5Q96GU1 130 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 TNIP3Q96KP6 325 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 SMOQ99835 787 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 MMRN2Q9H8L6 949 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 MAGEF1Q9HAY2 307 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 FSCN3Q9NQT6 498 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 TMEM74BQ9NUR3 256 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 EXOC1Q9NV70 894 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 TBC1D14Q9P2M4 693 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 MBD1Q9UIS9 605 aaPredicted RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 NUDT5Q9UKK9 219 aa9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 RALYQ9UKM9 306 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-203ENST00000570385 A0A1B0GVL5 298 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 E2F8A0AVK6 867 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 CDX4O14627 284 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 MDM4O15151 490 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 TLR5O60602 858 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 TOP3BO95985 862 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 NR3C1P04150 777 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 P2RY2P41231 377 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 GAD2Q05329 585 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 FOXC1Q12948 553 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 TRIM61Q5EBN2 209 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 DAB2IPQ5VWQ8 1189 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 TPGS1Q6ZTW0 290 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 SV2AQ7L0J3 742 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 LPCAT2Q7L5N7 544 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 GPRIN1Q7Z2K8 1008 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 DDX42Q86XP3 938 aaKnown RBP eCLIP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 MIB1Q86YT6 1006 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 PHTF2Q8N3S3 785 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZNF513Q8N8E2 541 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 OLIG1Q8TAK6 271 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 GOLGA5Q8TBA6 731 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 WHAMMQ8TF30 809 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 SPACA7Q96KW9 195 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 TWNKQ96RR1 684 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 ACOX2Q99424 681 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 TMEM9BQ9NQ34 198 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 OSER1Q9NX31 292 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 IL37Q9NZH6 218 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 CGNQ9P2M7 1197 aaKnown RBP9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 DEC1Q9P2X7 70 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 MAPK8IP1Q9UQF2 711 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 KNL1Q8NG31 2342 aa9.11□□□□□ -0.95
CTDNEP1-203ENST00000570385 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 C1QTNF9BB2RNN3 333 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 NEDD8-MDP1E9PL57 170 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 CYP26A1O43174 497 aa9.1□□□□□ -0.95
CTDNEP1-203ENST00000570385 KIF20AO95235 890 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms