RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 TULP2O00295 520 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 TRDMT1O14717 391 aaKnown RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 SCAMP3O14828 347 aaKnown RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 NFATC1O95644 943 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 PAEPP09466 180 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 ZNF132P52740 706 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 PDE4CQ08493 712 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 BST2Q10589 180 aaKnown RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 TMEM196Q5HYL7 178 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 DGKKQ5KSL6 1271 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 NAIF1Q69YI7 327 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 FSTL4Q6MZW2 842 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 Q6ZS52 159 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 SCD5Q86SK9 330 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 RBBP8NLQ8NC74 664 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 ZSWIM1Q9BR11 485 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 THAP9Q9H5L6 903 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.73□□□□□ -0.21
CNOT1-220ENST00000569916 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
CNOT1-220ENST00000569916 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 XPO1O14980 1071 aaKnown RBP13.72□□□□□ -0.21
CNOT1-220ENST00000569916 TBX18O95935 607 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 CYP17A1P05093 508 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 RARGP13631 454 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 SLC8A3P57103 927 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 AMPD2Q01433 879 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-220ENST00000569916 GAB4Q2WGN9 574 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 PKDCCQ504Y2 493 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 MAMSTRQ6ZN01 415 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 WBP2Q969T9 261 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 CRACR2AQ9BSW2 395 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-220ENST00000569916 NACA2Q9H009 215 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 FBRSL1Q9HCM7 1045 aaKnown RBP13.72□□□□□ -0.21
CNOT1-220ENST00000569916 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.72□□□□□ -0.21
CNOT1-220ENST00000569916 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
CNOT1-220ENST00000569916 GTPBP10A4D1E9 387 aaKnown RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 SLC9A3R1O14745 358 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 CALCAP01258 141 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 SETSIPP0DME0 302 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 IRF1P10914 325 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 TDGF1P13385 188 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 SLC9A1P19634 815 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 BRD2P25440 801 aaKnown RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 ATP5C1P36542 298 aaKnown RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 PLA2G4AP47712 749 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 PSEN1P49768 467 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 GALK1P51570 392 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 TKTL1P51854 596 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 GRSF1Q12849 480 aaKnown RBP eCLIP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 MAN2A1Q16706 1144 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 ZNF528Q3MIS6 628 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 CT47A1Q5JQC4 288 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-220ENST00000569916 KLHDC10Q6PID8 442 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 TSSK4Q6SA08 328 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 BHLHA9Q7RTU4 235 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 ADGRG2Q8IZP9 1017 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 SPEM1Q8N4L4 309 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 ZNF276Q8N554 614 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 UBA3Q8TBC4 463 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 NELL1Q92832 810 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 CD101Q93033 1021 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 P2RY13Q9BPV8 354 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 NAGPAQ9UK23 515 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 SH3BP1Q9Y3L3 701 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 R4GN57 208 aa13.71□□□□□ -0.21
CNOT1-220ENST00000569916 DMDP11532 3685 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 MDM4O15151 490 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 GREM1O60565 184 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 EGFP01133 1207 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 OPRD1P41143 372 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 CCR3P51677 355 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 SATB1Q01826 763 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 APBA1Q02410 837 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 NR1H3Q13133 447 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 DHCR24Q15392 516 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 STILQ15468 1287 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 CNGA2Q16280 664 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 PM20D1Q6GTS8 502 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 PKN3Q6P5Z2 889 aa13.7□□□□□ -0.22
CNOT1-220ENST00000569916 GJB7Q6PEY0 223 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms