RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PPM1LQ5SGD2 360 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CAND1Q86VP6 1230 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 CCDC25Q86WR0 208 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 HERC6Q8IVU3 1022 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 CCAR2Q8N163 923 aaKnown RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 ZNF512Q96ME7 567 aaPredicted RBP6.95□□□□□ -1.3
SMG1-217ENST00000569764 ZNF560Q96MR9 790 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 GBP3Q9H0R5 595 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 VPS11Q9H270 941 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 KIF9Q9HAQ2 790 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 SATB2Q9UPW6 733 aa6.95□□□□□ -1.3
SMG1-217ENST00000569764 SLC9A3R1O14745 358 aaPredicted RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 ABCB7O75027 752 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 SOCS5O75159 536 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ADCY8P40145 1251 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MRPS15P82914 257 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 MAP7Q14244 749 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 OCLNQ16625 522 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MEA1Q16626 185 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CD302Q8IX05 232 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 UBALD2Q8IYN6 164 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CMTR2Q8IYT2 770 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 ADGRF4Q8IZF3 695 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 BLIDQ8IZY5 108 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 C12orf50Q8NA57 414 aaPredicted RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 BCL7CQ8WUZ0 217 aaPredicted RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 NOX5Q96PH1 765 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MED15Q96RN5 788 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 PDCD2LQ9BRP1 358 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ZPBPQ9BS86 351 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 FBXO28Q9NVF7 368 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 SNX8Q9Y5X2 465 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ARFGEF1Q9Y6D6 1849 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ZNF233A6NK53 670 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MAN2B1O00754 1011 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 KIAA0391O15091 583 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 ZNF202O95125 648 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MARK3P27448 753 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ID4P47928 161 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 PSMD7P51665 324 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CARD18P57730 90 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 DSTNP60981 165 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 FOXK2Q01167 660 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 GABPAQ06546 454 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MYO1EQ12965 1108 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 DHX34Q14147 1143 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 USP39Q53GS9 565 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 B3GNT6Q6ZMB0 384 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 BRAPQ7Z569 592 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ATCAYQ86WG3 371 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 TRIM58Q8NG06 486 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 ATP8B4Q8TF62 1192 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 LRRC15Q8TF66 581 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 SAAL1Q96ER3 474 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CCT7Q99832 543 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 TRIM62Q9BVG3 475 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 EHD1Q9H4M9 534 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 KLHL11Q9NVR0 708 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 TEKT2Q9UIF3 430 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 LSM7Q9UK45 103 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 PIN4Q9Y237 131 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 A0A1W2PPH5 198 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 RGSL1A5PLK6 1076 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 HNRNPCL2B2RXH8 293 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 M0R2N6 131 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 SPTLC1O15269 473 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 HNRNPCL1O60812 293 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 PIAS2O75928 621 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 TARSP26639 723 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 CYP2C18P33260 490 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 QARSP47897 775 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 LIG4P49917 911 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CLNS1AP54105 237 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 ARID5BQ14865 1188 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 PCSK7Q16549 785 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 GKAP1Q5VSY0 366 aaPredicted RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 PCNX4Q63HM2 1172 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 KLC3Q6P597 504 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 SLC24A5Q71RS6 500 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CYFIP1Q7L576 1253 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 INPP5DQ92835 1189 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 NAF1Q96HR8 494 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 NRDE2Q9H7Z3 1164 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 FKBP14Q9NWM8 211 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 RPS6KA6Q9UK32 745 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MAGED2Q9UNF1 606 aaPredicted RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 DMDP11532 3685 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CTAGE15A4D2H0 777 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 H0Y626 953 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 MAP3K13O43283 966 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 PRPF6O94906 941 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 CTAGE8P0CG41 777 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 NNMTP40261 264 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 PNOCQ13519 176 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 GRIK4Q16099 956 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 CELF3Q5SZQ8 465 aaKnown RBP6.94□□□□□ -1.3
SMG1-217ENST00000569764 TMTC4Q5T4D3 741 aa6.94□□□□□ -1.3
SMG1-217ENST00000569764 IKBIPQ70UQ0 350 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms