RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 BMP15O95972 392 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 MT-CO3P00414 261 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 CHRM5P08912 532 aaPredicted RBP3.66□□□□□ -1.82
BBS4-215ENST00000569001 MYF5P13349 255 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 PEX2P28328 305 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 EPHA3P29320 983 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 CPT1AP50416 773 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 GATMP50440 423 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 TIAL1Q01085 375 aaKnown RBP eCLIP3.66□□□□□ -1.82
BBS4-215ENST00000569001 SLC29A2Q14542 456 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 INSCQ1MX18 579 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 ZNF750Q32MQ0 723 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 RRAGBQ5VZM2 374 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 NXNQ6DKJ4 435 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 PPP4R4Q6NUP7 873 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 TMEM65Q6PI78 240 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 SHC4Q6S5L8 630 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 CLEC9AQ6UXN8 241 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 USP49Q70CQ1 688 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 SFTPA1Q8IWL2 248 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 MYO1HQ8N1T3 1032 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 NRACQ8N912 160 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 C9orf106Q8NAJ2 232 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 PRSS3P2Q8NHM4 247 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 OSR1Q8TAX0 266 aaPredicted RBP3.66□□□□□ -1.82
BBS4-215ENST00000569001 ADAMTS18Q8TE60 1221 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 PNISRQ8TF01 805 aaKnown RBP3.66□□□□□ -1.82
BBS4-215ENST00000569001 TIFAQ96CG3 184 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 NMD3Q96D46 503 aaKnown RBP3.66□□□□□ -1.82
BBS4-215ENST00000569001 PRR11Q96HE9 360 aaPredicted RBP3.66□□□□□ -1.82
BBS4-215ENST00000569001 SUCLG2Q96I99 432 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 ZNF287Q9HBT7 754 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 MGAT4CQ9UBM8 478 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 AFG3L2Q9Y4W6 797 aa3.66□□□□□ -1.82
BBS4-215ENST00000569001 FRMPD2Q68DX3 1309 aaPredicted RBP3.66□□□□□ -1.82
BBS4-215ENST00000569001 ISM1B1AKI9 464 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 PRAMEF2O60811 474 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 TXNP10599 105 aaKnown RBP3.65□□□□□ -1.83
BBS4-215ENST00000569001 ATF7P17544 494 aaPredicted RBP3.65□□□□□ -1.83
BBS4-215ENST00000569001 TPH1P17752 444 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 PTGER1P34995 402 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 CARSP49589 748 aaKnown RBP3.65□□□□□ -1.83
BBS4-215ENST00000569001 YPEL5P62699 121 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 ZNF91Q05481 1191 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 SLC14A1Q13336 389 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 LARS2Q15031 903 aaKnown RBP3.65□□□□□ -1.83
BBS4-215ENST00000569001 ZNF260Q3ZCT1 412 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 MTHFD1LQ6UB35 978 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 DCDC5Q6ZRR9 648 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 TECPR1Q7Z6L1 1165 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 MAP4K1Q92918 833 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 RSPRY1Q96DX4 576 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 APIPQ96GX9 242 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 HS6ST2Q96MM7 605 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 FYTTD1Q96QD9 318 aaKnown RBP3.65□□□□□ -1.83
BBS4-215ENST00000569001 USP29Q9HBJ7 922 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 TMEM184CQ9NVA4 438 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 TUBA8Q9NY65 449 aaPredicted RBP3.65□□□□□ -1.83
BBS4-215ENST00000569001 MTMR4Q9NYA4 1195 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 CORO2BQ9UQ03 480 aa3.65□□□□□ -1.83
BBS4-215ENST00000569001 FER1L4A9Z1Z3 1794 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 DSCR3O14972 297 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 CCP110O43303 1012 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 FRS3O43559 492 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 BTF3P20290 206 aaKnown RBP3.64□□□□□ -1.83
BBS4-215ENST00000569001 NR4A2P43354 598 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 KCNB1Q14721 858 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 MFSD13AQ14CX5 517 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 POLD3Q15054 466 aaPredicted RBP3.64□□□□□ -1.83
BBS4-215ENST00000569001 TRIM71Q2Q1W2 868 aaKnown RBP3.64□□□□□ -1.83
BBS4-215ENST00000569001 TMTC4Q5T4D3 741 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 PLAG1Q6DJT9 500 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 AWAT2Q6E213 333 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 GRHL2Q6ISB3 625 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 DARS2Q6PI48 645 aaKnown RBP3.64□□□□□ -1.83
BBS4-215ENST00000569001 ZNF813Q6ZN06 617 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 WDR75Q8IWA0 830 aaKnown RBP3.64□□□□□ -1.83
BBS4-215ENST00000569001 LINC01465Q8N7H1 131 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 EDC3Q96F86 508 aaKnown RBP3.64□□□□□ -1.83
BBS4-215ENST00000569001 HIST1H2AAQ96QV6 131 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 FAM118BQ9BPY3 351 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 LRRC27Q9C0I9 530 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 SNX15Q9NRS6 342 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 DKK4Q9UBT3 224 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 TCEAL9Q9UHQ7 104 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 HPSEQ9Y251 543 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 SLC27A6Q9Y2P4 619 aa3.64□□□□□ -1.83
BBS4-215ENST00000569001 KRTAP29-1A8MX34 341 aaPredicted RBP3.63□□□□□ -1.83
BBS4-215ENST00000569001 CLIC1O00299 241 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 GOLIM4O00461 696 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 FYB1O15117 783 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 MGEA5O60502 916 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 ZBED1O96006 694 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 A1BGP04217 495 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 CACNB3P54284 484 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 FHL3Q13643 280 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 KPNB1Q14974 876 aaKnown RBP3.63□□□□□ -1.83
BBS4-215ENST00000569001 RBMS2Q15434 407 aaKnown RBP3.63□□□□□ -1.83
BBS4-215ENST00000569001 CC2D1BQ5T0F9 858 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms