RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 CHPFQ8IZ52 775 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 RGL4Q8IZJ4 473 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 MINDY1Q8N5J2 469 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 TERB1Q8NA31 727 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 SCFD1Q8WVM8 642 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 SYAP1Q96A49 352 aaPredicted RBP12.8□□□□□ -0.36
FANCA-232ENST00000568983 B3GNT5Q9BYG0 378 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 TNMDQ9H2S6 317 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 CCSER2Q9H7U1 834 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 DMAP1Q9NPF5 467 aaPredicted RBP12.8□□□□□ -0.36
FANCA-232ENST00000568983 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 KRT82Q9NSB4 513 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 TMEM30AQ9NV96 361 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
FANCA-232ENST00000568983 CYP8B1Q9UNU6 501 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 SPEGQ15772 3267 aa12.8□□□□□ -0.36
FANCA-232ENST00000568983 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 CLIC2O15247 247 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.365e-7■□□□□ 9
FANCA-232ENST00000568983 NDUFS2O75306 463 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 ZNF217O75362 1048 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 CST3P01034 146 aaPredicted RBP12.79□□□□□ -0.36
FANCA-232ENST00000568983 SYPP08247 313 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 SERPINF2P08697 491 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 GABRG2P18507 467 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 NTSR1P30989 418 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 AMPD3Q01432 767 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 GOLGA8FQ08AF8 430 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 GOLGA8DPQ0D2H9 430 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 PSMD6Q15008 389 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 FAM35AQ86V20 835 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 XXYLT1Q8NBI6 393 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 SCAMP5Q8TAC9 235 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 SMARCD1Q96GM5 515 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 HSPA12BQ96MM6 686 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 XPO6Q96QU8 1125 aaKnown RBP12.79□□□□□ -0.36
FANCA-232ENST00000568983 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 AGPAT3Q9NRZ7 376 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
FANCA-232ENST00000568983 GMIPQ9P107 970 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 LSM7Q9UK45 103 aaKnown RBP12.79□□□□□ -0.36
FANCA-232ENST00000568983 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 NME7Q9Y5B8 376 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 PCDHB9Q9Y5E1 797 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 MYOFQ9NZM1 2061 aa12.79□□□□□ -0.36
FANCA-232ENST00000568983 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 HOXC11O43248 304 aaPredicted RBP12.78□□□□□ -0.36
FANCA-232ENST00000568983 AP1G2O75843 785 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 ATICP31939 592 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 TUBP50607 506 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 MYL6P60660 151 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 SEMA3BQ13214 749 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 STK38Q15208 465 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 ZNF699Q32M78 642 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 FAM26FQ5R3K3 315 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 PEAR1Q5VY43 1037 aaPredicted RBP12.78□□□□□ -0.36
FANCA-232ENST00000568983 TPGS1Q6ZTW0 290 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 PIP4P1Q86T03 277 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 ETFBKMTQ8IXQ9 262 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 PHTF2Q8N3S3 785 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
FANCA-232ENST00000568983 BBS2Q9BXC9 721 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 SMYD3Q9H7B4 428 aa12.78□□□□□ -0.36
FANCA-232ENST00000568983 ASCC3Q8N3C0 2202 aaKnown RBP12.77□□□□□ -0.36
FANCA-232ENST00000568983 AKAP13Q12802 2813 aa12.77□□□□□ -0.36
FANCA-232ENST00000568983 ZZEF1O43149 2961 aa12.77□□□□□ -0.36
FANCA-232ENST00000568983 IGHV1OR15-9A0A0B4J2B8 117 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 TLR5O60602 858 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 FAM163BP0C2L3 166 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.37
FANCA-232ENST00000568983 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
FANCA-232ENST00000568983 GNSP15586 552 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 NDUFV2P19404 249 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 TRIM21P19474 475 aaKnown RBP12.77□□□□□ -0.37
FANCA-232ENST00000568983 RING1Q06587 406 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 HNRNPDQ14103 355 aaKnown RBP12.77□□□□□ -0.37
FANCA-232ENST00000568983 ACAP1Q15027 740 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 SLC39A14Q15043 492 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 ZNF423Q2M1K9 1284 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 PLEKHG6Q3KR16 790 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 EGFLAMQ63HQ2 1017 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
FANCA-232ENST00000568983 CHCHD4Q8N4Q1 142 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 TRIML1Q8N9V2 468 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 BHMTQ93088 406 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 DHX58Q96C10 678 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
FANCA-232ENST00000568983 TRIM9Q9C026 710 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms