RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 GOLGA4Q13439 2230 aaKnown RBP13.27□□□□□ -0.29
SNX29-207ENST00000568949 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
SNX29-207ENST00000568949 GOLGA8IPA6NC78 632 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 GOLGA8JA6NMD2 632 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 KIAA0391O15091 583 aaKnown RBP13.26□□□□□ -0.29
SNX29-207ENST00000568949 CBFA2T3O75081 653 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 NDUFS2O75306 463 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 WASP42768 502 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 SURF1Q15526 300 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 WDR45BQ5MNZ6 344 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 FREM2Q5SZK8 3169 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 MIB1Q86YT6 1006 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 NUP93Q8N1F7 819 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 MDM1Q8TC05 714 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 HNRNPLLQ8WVV9 542 aaKnown RBP13.26□□□□□ -0.29
SNX29-207ENST00000568949 CBWD1Q9BRT8 395 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 SPHK2Q9NRA0 654 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 OLFML3Q9NRN5 406 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 PCOLCE2Q9UKZ9 415 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 CYP8B1Q9UNU6 501 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 RAXQ9Y2V3 346 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 SH3BP1Q9Y3L3 701 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 NFE2L3Q9Y4A8 694 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 PCDHB13Q9Y5F0 798 aa13.26□□□□□ -0.29
SNX29-207ENST00000568949 SETXQ7Z333 2677 aaKnown RBP13.25□□□□□ -0.29
SNX29-207ENST00000568949 EIF4E1BA6NMX2 242 aaKnown RBP13.25□□□□□ -0.29
SNX29-207ENST00000568949 COCHO43405 550 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 TACC1O75410 805 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 RTN3O95197 1032 aaPredicted RBP13.25□□□□□ -0.29
SNX29-207ENST00000568949 GCNT3O95395 438 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 TNNC2P02585 160 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 ZNF883P0CG24 379 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 YWHAQP27348 245 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 GNL1P36915 607 aaPredicted RBP13.25□□□□□ -0.29
SNX29-207ENST00000568949 TUBP50607 506 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 GRIN1Q05586 938 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 GRIK2Q13002 908 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 DUOXA2Q1HG44 320 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 ANO4Q32M45 955 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 HECTD3Q5T447 861 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 SNX30Q5VWJ9 437 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 EGFLAMQ63HQ2 1017 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 GRAMD4Q6IC98 578 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 HS2ST1Q7LGA3 356 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 TMPRSS7Q7RTY8 843 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 TMEM25Q86YD3 366 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 BBS7Q8IWZ6 715 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 CHPFQ8IZ52 775 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 GPD1LQ8N335 351 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 DNASE2BQ8WZ79 361 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 BBC3Q96PG8 261 aaPredicted RBP13.25□□□□□ -0.29
SNX29-207ENST00000568949 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 GABRG3Q99928 467 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 TBC1D7Q9P0N9 293 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 KNL1Q8NG31 2342 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 CABIN1Q9Y6J0 2220 aa13.25□□□□□ -0.29
SNX29-207ENST00000568949 KNTC1P50748 2209 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 PTPRJQ12913 1337 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 A0A1B0GTW7 788 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 H3BQV1 296 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 GFRA2O00451 464 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 PTPN1P18031 435 aaKnown RBP13.24□□□□□ -0.29
SNX29-207ENST00000568949 CACNA2D1P54289 1103 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
SNX29-207ENST00000568949 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 FBXO32Q969P5 355 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 MRGPRX1Q96LB2 322 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 XPO6Q96QU8 1125 aaKnown RBP13.24□□□□□ -0.29
SNX29-207ENST00000568949 ACOX2Q99424 681 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 MRPL45Q9BRJ2 306 aaKnown RBP13.24□□□□□ -0.29
SNX29-207ENST00000568949 ZNF518BQ9C0D4 1074 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 PCIF1Q9H4Z3 704 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 NME7Q9Y5B8 376 aa13.24□□□□□ -0.29
SNX29-207ENST00000568949 LAMA5O15230 3695 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 ZNF233A6NK53 670 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 TRIM24O15164 1050 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 CACNG3O60359 315 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 DKK1O94907 266 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 CD6P30203 668 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 CASP5P51878 434 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
SNX29-207ENST00000568949 IL27RAQ6UWB1 636 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 NOC3LQ8WTT2 800 aaKnown RBP13.23□□□□□ -0.29
SNX29-207ENST00000568949 SCFD1Q8WVM8 642 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 CDC6Q99741 560 aa13.23□□□□□ -0.29
SNX29-207ENST00000568949 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
SNX29-207ENST00000568949 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms