RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 TAF5Q15542 800 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 WDR59Q6PJI9 974 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 DNAAF5Q86Y56 855 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 GJD3Q8N144 294 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 SLC30A5Q8TAD4 765 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 AGPAT1Q99943 283 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 TRPC7Q9HCX4 862 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 MYO10Q9HD67 2058 aa17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 ZNF638Q14966 1978 aaKnown RBP17.5■□□□□ 0.39
CNEP1R1-210ENST00000568890 ERBB2P04626 1255 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 UNGP13051 313 aaPredicted RBP17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 DAOAP59103 153 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 ZNF677Q86XU0 584 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 MRPS31Q92665 395 aaKnown RBP17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 MRFAP1L1Q96HT8 127 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 PPP1R13BQ96KQ4 1090 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 SMOC2Q9H3U7 446 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 EHD2Q9NZN4 543 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 NUMBLQ9Y6R0 609 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 COCHO43405 550 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 FYNP06241 537 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 HDCP19113 662 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 PRKCIP41743 596 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 HTR4Q13639 388 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 NAA35Q5VZE5 725 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 TMC6Q7Z403 805 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 OVCA2Q8WZ82 227 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 SMARCD2Q92925 531 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 USP13Q92995 863 aaPredicted RBP17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 CNGB3Q9NQW8 809 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 TAS2R14Q9NYV8 317 aa17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 ZFP37Q9Y6Q3 630 aaPredicted RBP17.49■□□□□ 0.39
CNEP1R1-210ENST00000568890 OLFM2O95897 454 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 PPP3CCP48454 512 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 RNF135Q8IUD6 432 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 TMEM35BQ8NCS4 154 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 SYN2Q92777 582 aaPredicted RBP17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 UHRF1Q96T88 793 aaPredicted RBP17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 KXD1Q9BQD3 176 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 PDCL3Q9H2J4 239 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 TRPV4Q9HBA0 871 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 TLR8Q9NR97 1041 aaKnown RBP17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 NAGPAQ9UK23 515 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 MDM4O15151 490 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 ASIC2Q16515 512 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 ARHGAP15Q53QZ3 475 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 BSPRYQ5W0U4 402 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 SIX6OS1Q8N1H7 587 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 SCML4Q8N228 414 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 SLC44A3Q8N4M1 653 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 EDEM1Q92611 657 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 WBP2Q969T9 261 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 ZFRQ96KR1 1074 aaKnown RBP17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 GCNAQ96QF7 691 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 DNAJC7Q99615 494 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 CYLDQ9NQC7 956 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 GKN1Q9NS71 199 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 ARHGAP20Q9P2F6 1191 aa17.48■□□□□ 0.39
CNEP1R1-210ENST00000568890 DDX3XO00571 662 aaKnown RBP eCLIP17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 TLR5O60602 858 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 ADCY5O95622 1261 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 RARGP13631 454 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 HNRNPH3P31942 346 aaKnown RBP17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 YWHAGP61981 247 aaKnown RBP eCLIP17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 KLHL30Q0D2K2 578 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 PTP4A2Q12974 167 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 HECTD3Q5T447 861 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
CNEP1R1-210ENST00000568890 LSM8O95777 96 aaKnown RBP17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 WEE1P30291 646 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 ACADSBP45954 432 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 GABRB2P47870 512 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 CLEC16AQ2KHT3 1053 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 VITQ6UXI7 678 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 PHLDB2Q86SQ0 1253 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 ZNF397Q8NF99 534 aaPredicted RBP17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 OR8K1Q8NGG5 319 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 IQCDQ96DY2 449 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 TDP1Q9NUW8 608 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 ANAPC1Q9H1A4 1944 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 PATJQ8NI35 1801 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 MMP8P22894 467 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 DDX6P26196 483 aaKnown RBP eCLIP17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 AVPR1AP37288 418 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 SYPL2Q5VXT5 272 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 FAM183BPQ6ZVS7 135 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 TC2NQ8N9U0 490 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 CHP1Q99653 195 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 ZFP14Q9HCL3 533 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 SMPD4Q9NXE4 827 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 CLIC5Q9NZA1 410 aa17.46■□□□□ 0.39
CNEP1R1-210ENST00000568890 SOBPA7XYQ1 873 aa17.45■□□□□ 0.38
CNEP1R1-210ENST00000568890 HEPACAM2A8MVW5 462 aa17.45■□□□□ 0.38
CNEP1R1-210ENST00000568890 NARSO43776 548 aaKnown RBP17.45■□□□□ 0.38
CNEP1R1-210ENST00000568890 MFAP3LO75121 409 aa17.45■□□□□ 0.38
CNEP1R1-210ENST00000568890 CKMP06732 381 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms