RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
NME3-211ENST00000568561 HMGXB4Q9UGU5 601 aa16.47■□□□□ 0.23
NME3-211ENST00000568561 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
NME3-211ENST00000568561 SH3BP1Q9Y3L3 701 aa16.47■□□□□ 0.23
NME3-211ENST00000568561 ATP8B3O60423 1300 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 E2F8A0AVK6 867 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 LRRIQ3A6PVS8 624 aaPredicted RBP16.46■□□□□ 0.23
NME3-211ENST00000568561 C1QTNF9BB2RNN3 333 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 TNFRSF10BO14763 440 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 MAP3K13O43283 966 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 AP1G2O75843 785 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 YEATS4O95619 227 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 C1QTNF9P0C862 333 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 CCDC130P13994 396 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 ATICP31939 592 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 EIF2DP41214 584 aaKnown RBP16.46■□□□□ 0.23
NME3-211ENST00000568561 GRIA2P42262 883 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 WASP42768 502 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 MAPK8P45983 427 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 BMT2Q1RMZ1 405 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 TRIM61Q5EBN2 209 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 ZNF667Q5HYK9 610 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 EOGTQ5NDL2 527 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 ACOT1Q86TX2 421 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 KIAA1958Q8N8K9 716 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 PDZD8Q8NEN9 1154 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 SPACA7Q96KW9 195 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 POLMQ9NP87 494 aaPredicted RBP16.46■□□□□ 0.23
NME3-211ENST00000568561 DMAP1Q9NPF5 467 aaPredicted RBP16.46■□□□□ 0.23
NME3-211ENST00000568561 TMEM74BQ9NUR3 256 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 TBC1D14Q9P2M4 693 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 ZZEF1O43149 2961 aa16.46■□□□□ 0.23
NME3-211ENST00000568561 TBC1D3BA6NDS4 549 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.45■□□□□ 0.22
NME3-211ENST00000568561 TULP3O75386 442 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 BEST1O76090 585 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 VNN1O95497 513 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 FAM163BP0C2L3 166 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 GAD2Q05329 585 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 NCOA4Q13772 614 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 KNOP1Q1ED39 458 aaKnown RBP16.45■□□□□ 0.22
NME3-211ENST00000568561 ANO4Q32M45 955 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 MAP7D1Q3KQU3 841 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 C10orf76Q5T2E6 689 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 LPCAT2Q7L5N7 544 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 TMEM25Q86YD3 366 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 ETFBKMTQ8IXQ9 262 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 C12orf56Q8IXR9 622 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 DEFB124Q8NES8 71 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 ZMIZ2Q8NF64 920 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 OVCA2Q8WZ82 227 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 SMOQ99835 787 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 NACA2Q9H009 215 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 FSCN3Q9NQT6 498 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.22
NME3-211ENST00000568561 FAM49BQ9NUQ9 324 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 HCN2Q9UL51 889 aa16.45■□□□□ 0.22
NME3-211ENST00000568561 SNRPFP62306 86 aaKnown RBP16.44■□□□□ 0.22
NME3-211ENST00000568561 DLG4P78352 724 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 BTBD8Q5XKL5 378 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 KIAA1211LQ6NV74 962 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 MIB1Q86YT6 1006 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 ZNF513Q8N8E2 541 aaPredicted RBP16.44■□□□□ 0.22
NME3-211ENST00000568561 SLC2A14Q8TDB8 520 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 PARD3BQ8TEW8 1205 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 MAGEF1Q9HAY2 307 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 SPHK2Q9NRA0 654 aa16.44■□□□□ 0.22
NME3-211ENST00000568561 PKD1L2Q7Z442 2459 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 A0A0A0MRY4 1105 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 HOXC11O43248 304 aaPredicted RBP16.43■□□□□ 0.22
NME3-211ENST00000568561 TBX18O95935 607 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 C4BPAP04003 597 aaKnown RBP16.43■□□□□ 0.22
NME3-211ENST00000568561 PROS1P07225 676 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 ZDHHC11BP0C7U3 371 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 ITPKAP23677 461 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 TNFRSF4P43489 277 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 ME1P48163 572 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 MAP3K7CLP57077 242 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 HSF5Q4G112 596 aaPredicted RBP16.43■□□□□ 0.22
NME3-211ENST00000568561 LYSMD4Q5XG99 296 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 SPOPLQ6IQ16 392 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 GPRIN1Q7Z2K8 1008 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 TERB1Q8NA31 727 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 KIAA0895Q8NCT3 520 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 OTUB2Q96DC9 234 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 TNIP3Q96KP6 325 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 VRTNQ9H8Y1 702 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 CALCOCO1Q9P1Z2 691 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 DEC1Q9P2X7 70 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 PCDHA7Q9UN72 937 aa16.43■□□□□ 0.22
NME3-211ENST00000568561 PCDH15Q96QU1 1955 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 PCNX2A6NKB5 2137 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 PVALEFA0A1B0GWK0 134 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 KLRC4O43908 158 aa16.42■□□□□ 0.22
NME3-211ENST00000568561 TLR5O60602 858 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms