RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 HAPLN2Q9GZV7 340 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 OCEL1Q9H607 264 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 ZNF395Q9H8N7 513 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 SSX2IPQ9Y2D8 614 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 A0A0B4J269 797 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 CHADO15335 359 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 ZNF862O60290 1169 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 DGAT1O75907 488 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 PIGRP01833 764 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 PRKCHP24723 683 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 PSMA2P25787 234 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 ALDH18A1P54886 795 aaKnown RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 BTKQ06187 659 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 TUBB3Q13509 450 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 PGM5Q15124 567 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 HADHQ16836 314 aaKnown RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 PGM2L1Q6PCE3 622 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 SLC25A41Q8N5S1 370 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 KLHL4Q9C0H6 718 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 MAP3K20Q9NYL2 800 aaKnown RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 RBAKQ9NYW8 714 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-215ENST00000566843 TCEAL9Q9UHQ7 104 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 PCDHGC3Q9UN70 934 aa16.3■□□□□ 0.2
COMMD4-215ENST00000566843 TRDMT1O14717 391 aaKnown RBP16.29■□□□□ 0.2
COMMD4-215ENST00000566843 PYGLP06737 847 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 BPGMP07738 259 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-215ENST00000566843 EIF4BP23588 611 aaKnown RBP16.29■□□□□ 0.2
COMMD4-215ENST00000566843 DBN1Q16643 649 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 CFAP157Q5JU67 520 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 LGSNQ5TDP6 509 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 PIP4K2CQ8TBX8 421 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 JADE3Q92613 823 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 FRMD8Q9BZ67 464 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-215ENST00000566843 SLC9A2Q9UBY0 812 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 CNTNAP2Q9UHC6 1331 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 PCDHA10Q9Y5I2 948 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 MCF2LO15068 1137 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 RBP3P10745 1247 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 VAV1P15498 845 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 NCOA4Q13772 614 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 ITGA9Q13797 1035 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 CCNIQ14094 377 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 UBAP2LQ14157 1087 aaKnown RBP16.29■□□□□ 0.2
COMMD4-215ENST00000566843 SMTNL2Q2TAL5 461 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 RABGAP1LQ5R372 815 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 ARCQ7LC44 396 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 PPM1NQ8N819 430 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 PRMT6Q96LA8 375 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-215ENST00000566843 C20orf27Q9GZN8 174 aa16.29■□□□□ 0.2
COMMD4-215ENST00000566843 CXorf49A8MYA2 514 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 STAM2O75886 525 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CD48P09326 243 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 VCLP18206 1134 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 EIF2AK2P19525 551 aaKnown RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 RFC1P35251 1148 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 RANBP1P43487 201 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 ERFP50548 548 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 YWHAZP63104 245 aaKnown RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CYP4A22Q5TCH4 519 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 MAP3K21Q5TCX8 1036 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 RFX6Q8HWS3 928 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CMASQ8NFW8 434 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 SHKBP1Q8TBC3 707 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 STN1Q9H668 368 aaKnown RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 PLAC1Q9HBJ0 212 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 ADAMTS6Q9UKP5 1117 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 SIP14410 1827 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CYB561D2O14569 222 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CASQ2O14958 399 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 PEX1O43933 1283 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 OPHN1O60890 802 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
COMMD4-215ENST00000566843 L1CAMP32004 1257 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CRHR1P34998 444 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 KCNT1Q5JUK3 1230 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 SMYD5Q6GMV2 418 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 SLFN12LQ6IEE8 588 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 LCA5Q86VQ0 697 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 PYDC1Q8WXC3 89 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 CFAP36Q96G28 342 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 RILPQ96NA2 401 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 BTBD9Q96Q07 612 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 POPDC2Q9HBU9 364 aa16.28■□□□□ 0.2
COMMD4-215ENST00000566843 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms