RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 FGF19O95750 216 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 BMP1P13497 986 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 LCP1P13796 627 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 SP100P23497 879 aaPredicted RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 ACADSBP45954 432 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 GABRB2P47870 512 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 TUBP50607 506 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 GSCP56915 257 aaPredicted RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 CDK17Q00537 523 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 ZP2Q05996 745 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 PUS10Q3MIT2 529 aaKnown RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 CYP4A22Q5TCH4 519 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 MMS22LQ6ZRQ5 1243 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 XYLT1Q86Y38 959 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 DNAAF5Q86Y56 855 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 TMEM139Q8IV31 216 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 DRC7Q8IY82 874 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 SIX6OS1Q8N1H7 587 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 PDZD8Q8NEN9 1154 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 RIN3Q8TB24 985 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 ATXN2LQ8WWM7 1075 aaKnown RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 PPP1R13BQ96KQ4 1090 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 SLITRK1Q96PX8 696 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 GCNAQ96QF7 691 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 CHP1Q99653 195 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 PHF7Q9BWX1 381 aaPredicted RBP8.58□□□□□ -1.04
CDH13-208ENST00000566333 CCSER2Q9H7U1 834 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 ST7Q9NRC1 585 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 EHD2Q9NZN4 543 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 EPS15L1Q9UBC2 864 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 CDH7Q9ULB5 785 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 USTQ9Y2C2 406 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 CEP83Q9Y592 693 aa8.58□□□□□ -1.04
CDH13-208ENST00000566333 A0A087X0T9 212 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 SSU72P8A0A1W2PR75 194 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TCRBV5S1A1TA0A578 114 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 LOC730098B7Z3J9 87 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 ZNF263O14978 683 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 COCHO43405 550 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 FYNP06241 537 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TPM1P09493 284 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 FAM228BP0C875 321 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 LAMP2P13473 410 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 NSFP46459 744 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 MRE11P49959 708 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 YWHAGP61981 247 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH13-208ENST00000566333 MRPS5P82675 430 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 ZXDBP98169 803 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 USP4Q13107 963 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 HTR4Q13639 388 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 GSE1Q14687 1217 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TAF5Q15542 800 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TAF12Q16514 161 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 AAK1Q2M2I8 961 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 GPR158Q5T848 1215 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 OTUD1Q5VV17 481 aaPredicted RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 TXNDC8Q6A555 127 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TRNP1Q6NT89 227 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 MON1AQ86VX9 555 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH13-208ENST00000566333 ADHFE1Q8IWW8 467 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TDRD5Q8NAT2 981 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 SPC24Q8NBT2 197 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 IPO4Q8TEX9 1081 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 IRGQQ8WZA9 623 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 MRPS31Q92665 395 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH13-208ENST00000566333 RSPRY1Q96DX4 576 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 ASB16Q96NS5 453 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 NOX5Q96PH1 765 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 ASB2Q96Q27 587 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 PANX2Q96RD6 677 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 C11orf70Q9BRQ4 267 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 SLC46A2Q9BY10 475 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 ADAM33Q9BZ11 813 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 MIS12Q9H081 205 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 PDCL3Q9H2J4 239 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 ATXN3LQ9H3M9 355 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TASP1Q9H6P5 420 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TLR8Q9NR97 1041 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 SEPT11Q9NVA2 429 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH13-208ENST00000566333 CLIC5Q9NZA1 410 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH13-208ENST00000566333 GDE1Q9NZC3 331 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 TRPM5Q9NZQ8 1165 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 IMPACTQ9P2X3 320 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 CHORDC1Q9UHD1 332 aaPredicted RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 CCL26Q9Y258 94 aa8.57□□□□□ -1.04
CDH13-208ENST00000566333 BZW2Q9Y6E2 419 aaKnown RBP8.57□□□□□ -1.04
CDH13-208ENST00000566333 C19orf67A6NJJ6 358 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
CDH13-208ENST00000566333 ANHXE9PGG2 379 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms