RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CILPO75339 1184 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 APBB3O95704 486 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 FAM200BP0CF97 657 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 CHRM1P11229 460 aaPredicted RBP19.37■□□□□ 0.69
USB1-213ENST00000566292 ADH5P11766 374 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 EDRF1Q3B7T1 1238 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 FMR1NBQ8N0W7 255 aaPredicted RBP19.37■□□□□ 0.69
USB1-213ENST00000566292 CYFIP2Q96F07 1278 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 LOXL4Q96JB6 756 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 NT5C1AQ9BXI3 368 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 ARRDC1-AS1Q9H2J1 176 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 TBC1D14Q9P2M4 693 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 EBF1Q9UH73 591 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 NUP205Q92621 2012 aa19.37■□□□□ 0.69
USB1-213ENST00000566292 THADAQ6YHU6 1953 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.36■□□□□ 0.69
USB1-213ENST00000566292 DCDC2BA2VCK2 349 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 GDF9O60383 454 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 TLR5O60602 858 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 EPN2O95208 641 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 ADH1CP00326 375 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 CD58P19256 250 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 EIF2DP41214 584 aaKnown RBP19.36■□□□□ 0.69
USB1-213ENST00000566292 LY6G5CQ5SRR4 150 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 BBS7Q8IWZ6 715 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 CCDC26Q8TAB7 109 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 NETO1Q8TDF5 533 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 SEMA4DQ92854 862 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 JAKMIP2Q96AA8 810 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 OTUB2Q96DC9 234 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 ZC3H10Q96K80 434 aaKnown RBP19.36■□□□□ 0.69
USB1-213ENST00000566292 PNKPQ96T60 521 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 RTKNQ9BST9 563 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 FBXO44Q9H4M3 255 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 TLR8Q9NR97 1041 aaKnown RBP19.36■□□□□ 0.69
USB1-213ENST00000566292 OSER1Q9NX31 292 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 SH3BP1Q9Y3L3 701 aa19.36■□□□□ 0.69
USB1-213ENST00000566292 DCLK1O15075 740 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 CYP26A1O43174 497 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 TBX18O95935 607 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 IRF1P10914 325 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 GTF2H1P32780 548 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 CCDC6Q16204 474 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 PLK5Q496M5 336 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 KRT39Q6A163 491 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 PHTF2Q8N3S3 785 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 CCDC33Q8N5R6 958 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 TSTD1Q8NFU3 115 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 DUSP9Q99956 384 aaKnown RBP19.35■□□□□ 0.69
USB1-213ENST00000566292 DUSP15Q9H1R2 295 aaPredicted RBP19.35■□□□□ 0.69
USB1-213ENST00000566292 MMP17Q9ULZ9 603 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 SCML2Q9UQR0 700 aa19.35■□□□□ 0.69
USB1-213ENST00000566292 A0A0A0MRY4 1105 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 GREM1O60565 184 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 KAT7O95251 611 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 APODP05090 189 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 HNRNPLP14866 589 aaKnown RBP eCLIP19.34■□□□□ 0.69
USB1-213ENST00000566292 PRCPP42785 496 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 DGKEP52429 567 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 MRPS21P82921 87 aaKnown RBP19.34■□□□□ 0.69
USB1-213ENST00000566292 KDSRQ06136 332 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 SF3A2Q15428 464 aaKnown RBP19.34■□□□□ 0.69
USB1-213ENST00000566292 PPP1R26Q5T8A7 1209 aaPredicted RBP19.34■□□□□ 0.69
USB1-213ENST00000566292 ETFBKMTQ8IXQ9 262 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 KLF16Q9BXK1 252 aaPredicted RBP19.34■□□□□ 0.69
USB1-213ENST00000566292 NMUR1Q9HB89 426 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 PNPLA8Q9NP80 782 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 CYLDQ9NQC7 956 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 ARHGEF4Q9NR80 690 aa19.34■□□□□ 0.69
USB1-213ENST00000566292 SLC30A4O14863 429 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 TRIM21P19474 475 aaKnown RBP19.33■□□□□ 0.68
USB1-213ENST00000566292 ACO1P21399 889 aaKnown RBP19.33■□□□□ 0.68
USB1-213ENST00000566292 TIE1P35590 1138 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 KIR2DL1P43626 348 aaPredicted RBP19.33■□□□□ 0.68
USB1-213ENST00000566292 MXI1P50539 228 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 GAD2Q05329 585 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 ZNF394Q53GI3 561 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 PLA2G2CQ5R387 149 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 EMC10Q5UCC4 262 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 TMEM92Q6UXU6 159 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 RASSF3Q86WH2 238 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 ALLCQ8N6M5 410 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 NAT16Q8N8M0 369 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 IL17RCQ8NAC3 791 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 CCDC150Q8NCX0 1101 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 ENGASEQ8NFI3 743 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.68
USB1-213ENST00000566292 CCDC34Q96HJ3 373 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 TPSD1Q9BZJ3 242 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 NACA2Q9H009 215 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 SPHK2Q9NRA0 654 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 PCDHA5Q9Y5H7 936 aa19.33■□□□□ 0.68
USB1-213ENST00000566292 PLXND1Q9Y4D7 1925 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 A0A1W2PQH9 124 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.32■□□□□ 0.68
USB1-213ENST00000566292 CETN3O15182 167 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 HOXC11O43248 304 aaPredicted RBP19.32■□□□□ 0.68
USB1-213ENST00000566292 KLF8O95600 359 aaPredicted RBP19.32■□□□□ 0.68
USB1-213ENST00000566292 ZNF806P0C7X5 589 aa19.32■□□□□ 0.68
USB1-213ENST00000566292 EPB41P11171 864 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms