RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 ZNF197O14709 1029 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 MBTPS2O43462 519 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 FBXO21O94952 628 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 ZBED1O96006 694 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 FAM228BP0C875 321 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 COL6A3P12111 3177 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 KCNA5P22460 613 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 CCR2P41597 374 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 RGS7P49802 495 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 CBX1P83916 185 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 ELF2Q15723 593 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 PUS10Q3MIT2 529 aaKnown RBP13.26□□□□□ -0.29
SF3B3-206ENST00000565990 NAA35Q5VZE5 725 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 FBXO38Q6PIJ6 1188 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 ZNF662Q6ZS27 426 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 ERICH1Q86X53 443 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 ZDHHC17Q8IUH5 632 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 IRGQQ8WZA9 623 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.29
SF3B3-206ENST00000565990 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 RIPOR3Q96MK2 946 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 NHEJ1Q9H9Q4 299 aaPredicted RBP13.26□□□□□ -0.29
SF3B3-206ENST00000565990 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 CHORDC1Q9UHD1 332 aaPredicted RBP13.26□□□□□ -0.29
SF3B3-206ENST00000565990 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
SF3B3-206ENST00000565990 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 C5orf42Q9H799 3197 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 ZNF840PA6NDX5 716 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 E5RJQ4 531 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 PAPSS1O43252 624 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 RTN2O75298 545 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 LCA5LO95447 670 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 LCP1P13796 627 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 WEE1P30291 646 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 PGFP49763 221 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 DAOAP59103 153 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 NTHL1P78549 312 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 MRPS5P82675 430 aaKnown RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 ZNF268Q14587 947 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SKIV2LQ15477 1246 aaKnown RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 TAF12Q16514 161 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SLC18A3Q16572 532 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SLC5A9Q2M3M2 681 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 PTPN20Q4JDL3 420 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 POTEHQ6S545 545 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 BEND5Q7L4P6 421 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SCD5Q86SK9 330 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 VPS36Q86VN1 386 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 CCDC170Q8IYT3 715 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 CEP112Q8N8E3 955 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 PDZD8Q8NEN9 1154 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SHKBP1Q8TBC3 707 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SLITRK1Q96PX8 696 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 APOL5Q9BWW9 433 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 ULBP1Q9BZM6 244 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 MIS12Q9H081 205 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 ASAH2Q9NR71 780 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 TJP2Q9UDY2 1190 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 MAGED2Q9UNF1 606 aaPredicted RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 MRFAP1Q9Y605 127 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 DOCK8Q8NF50 2099 aa13.25□□□□□ -0.29
SF3B3-206ENST00000565990 SPTBN5Q9NRC6 3674 aaKnown RBP13.25□□□□□ -0.29
SF3B3-206ENST00000565990 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 NRG2O14511 850 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 FTLP02792 175 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 ERBB2P04626 1255 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 FYNP06241 537 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 PFKLP17858 780 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 GABRR2P28476 465 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 CDC25CP30307 473 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 SCNN1AP37088 669 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 PSEN1P49768 467 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 SLC6A3Q01959 620 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 ADIGQ0VDE8 80 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 CBX2Q14781 532 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 TMCO3Q6UWJ1 677 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 MON1BQ7L1V2 547 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 ARCQ7LC44 396 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 MCOLN2Q8IZK6 566 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 SIX6OS1Q8N1H7 587 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 NDRG1Q92597 394 aaKnown RBP13.24□□□□□ -0.29
SF3B3-206ENST00000565990 TCEAL4Q96EI5 215 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 MCRS1Q96EZ8 462 aa13.24□□□□□ -0.29
SF3B3-206ENST00000565990 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms