RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PCED1BQ96HM7 432 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 PEBP4Q96S96 227 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 NEUROG2Q9H2A3 272 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 DPH5Q9H2P9 285 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 C10orf88Q9H8K7 445 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 GDF3Q9NR23 364 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 RAB6BQ9NRW1 208 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 SLC38A7Q9NVC3 462 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 TMLHEQ9NVH6 421 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 CALCOCO1Q9P1Z2 691 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 HESX1Q9UBX0 185 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
CHD9-217ENST00000565832 C2CD4BA6NLJ0 364 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 NT5C1B-RDH14C9J2C7 533 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 FSCN2O14926 492 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 OR4Q2P0C623 313 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 WARSP23381 471 aaKnown RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 MIPP30301 263 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 PLA2G4AP47712 749 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 EPHA4P54764 986 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 PITX1P78337 314 aaPredicted RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 SLC25A11Q02978 314 aaKnown RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 FAAP100Q0VG06 881 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 MMRN1Q13201 1228 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 PIGHQ14442 188 aaPredicted RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 SEL1L2Q5TEA6 688 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 SCYL2Q6P3W7 929 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 CCDC137Q6PK04 289 aaKnown RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 PIGZQ86VD9 579 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 HACE1Q8IYU2 909 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 STKLD1Q8NE28 680 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 SCG3Q8WXD2 468 aaKnown RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 HAUS1Q96CS2 278 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 MED10Q9BTT4 135 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 TSPAN10Q9H1Z9 355 aaPredicted RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 OGDHLQ9ULD0 1010 aa6.52□□□□□ -1.36
CHD9-217ENST00000565832 PRG3Q9Y2Y8 225 aaPredicted RBP6.52□□□□□ -1.36
CHD9-217ENST00000565832 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.52□□□□□ -1.36
CHD9-217ENST00000565832 LRRD1A4D1F6 860 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 C3orf70A6NLC5 250 aaPredicted RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 UPP2O95045 317 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 ECHS1P30084 290 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 RPL9P32969 192 aaKnown RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 PTGIRP43119 386 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 TNNT3P45378 269 aaPredicted RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 OR1G1P47890 313 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 PRMT2P55345 433 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 DYNLT1P63172 113 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 FAM189BP81408 668 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 DR1Q01658 176 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 SLC6A3Q01959 620 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 TLE2Q04725 743 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 FOXC1Q12948 553 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 TUSC3Q13454 348 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 MTMR3Q13615 1198 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 SMC1AQ14683 1233 aaKnown RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 CASP8Q14790 479 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 TRIM60Q495X7 471 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 GLE1Q53GS7 698 aaKnown RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 ZNF697Q5TEC3 545 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 ARHGAP17Q68EM7 881 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 CCDC70Q6NSX1 233 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 SLC39A5Q6ZMH5 540 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 CLEC20AQ6ZU45 233 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 HFE2Q6ZVN8 426 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 CYP4V2Q6ZWL3 525 aaPredicted RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 GPRIN1Q7Z2K8 1008 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 CCDC105Q8IYK2 499 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 TTC39CQ8N584 583 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 ZMIZ2Q8NF64 920 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 OR10T2Q8NGX3 314 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 AENQ8WTP8 325 aaKnown RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 RIN2Q8WYP3 895 aaPredicted RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 HSPH1Q92598 858 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 PGBD4Q96DM1 585 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 DUSP16Q9BY84 665 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 OSBPL8Q9BZF1 889 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 TBC1D13Q9NVG8 400 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 GPATCH2LQ9NWQ4 482 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 SNX24Q9Y343 169 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 MYO7AQ13402 2215 aa6.52□□□□□ -1.37
CHD9-217ENST00000565832 ZNF638Q14966 1978 aaKnown RBP6.52□□□□□ -1.37
CHD9-217ENST00000565832 SYNJ2BP-COX16A0A087WUM0 186 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 CCDC188H7C350 402 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 MAP2K7O14733 419 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 NRP1O14786 923 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 KRT1P04264 644 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 RPLP2P05387 115 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 IGFBP4P22692 258 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ITGB8P26012 769 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 COILP38432 576 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 RAB27AP51159 221 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ZNF143P52747 638 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 RNASELQ05823 741 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 ADIGQ0VDE8 80 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 BST2Q10589 180 aaKnown RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 KLF1Q13351 362 aaPredicted RBP6.51□□□□□ -1.37
CHD9-217ENST00000565832 PLEKHG4Q58EX7 1191 aa6.51□□□□□ -1.37
CHD9-217ENST00000565832 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms