RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 HHLA1C9JL84 531 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CILPO75339 1184 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 APBB3O95704 486 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 ADH1CP00326 375 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 IRF1P10914 325 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 ADH5P11766 374 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CD58P19256 250 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 EDRF1Q3B7T1 1238 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 C2orf27AQ580R0 203 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CCDC26Q8TAB7 109 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 SEMA4DQ92854 862 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CYFIP2Q96F07 1278 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 ARRDC1-AS1Q9H2J1 176 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 FBXO44Q9H4M3 255 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 SH3BP1Q9Y3L3 701 aa18.42■□□□□ 0.54
MAP1LC3B-207ENST00000565788 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 TLR5O60602 858 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 EPN2O95208 641 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 TRIM21P19474 475 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 GTF2H1P32780 548 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 EIF2DP41214 584 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 MCCD1P59942 119 aaPredicted RBP18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 KDSRQ06136 332 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CCDC6Q16204 474 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 LY6G5CQ5SRR4 150 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 KRT39Q6A163 491 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 BBS7Q8IWZ6 715 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CCDC33Q8N5R6 958 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 TSTD1Q8NFU3 115 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CCDC34Q96HJ3 373 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 LOXL4Q96JB6 756 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 PNKPQ96T60 521 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 RTKNQ9BST9 563 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 NACA2Q9H009 215 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 TLR8Q9NR97 1041 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 EBF1Q9UH73 591 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 MMP17Q9ULZ9 603 aa18.41■□□□□ 0.54
MAP1LC3B-207ENST00000565788 DCLK1O15075 740 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CYP26A1O43174 497 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 GDF9O60383 454 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 TBX18O95935 607 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 APODP05090 189 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CHRM1P11229 460 aaPredicted RBP18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 ACO1P21399 889 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 PRCPP42785 496 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 MXI1P50539 228 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 DGKEP52429 567 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 PLK5Q496M5 336 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 ZNF394Q53GI3 561 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 PPP1R26Q5T8A7 1209 aaPredicted RBP18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 NETO1Q8TDF5 533 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 OTUB2Q96DC9 234 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 ARHGEF4Q9NR80 690 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 OSER1Q9NX31 292 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 SCML2Q9UQR0 700 aa18.4■□□□□ 0.54
MAP1LC3B-207ENST00000565788 DCDC2BA2VCK2 349 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 CETN3O15182 167 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 KAT7O95251 611 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 EPB41P11171 864 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 MRPS21P82921 87 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 GAD2Q05329 585 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ZNF658Q5TYW1 1059 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 FBXL13Q8NEE6 735 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ENGASEQ8NFI3 743 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ERCC4Q92889 916 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ZC3H10Q96K80 434 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 DUSP9Q99956 384 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 KLF16Q9BXK1 252 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 TPSD1Q9BZJ3 242 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 DUSP15Q9H1R2 295 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 NMUR1Q9HB89 426 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 PNPLA8Q9NP80 782 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 CYLDQ9NQC7 956 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 RMND1Q9NWS8 449 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 RAB20Q9NX57 234 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 PCDHA5Q9Y5H7 936 aa18.39■□□□□ 0.53
MAP1LC3B-207ENST00000565788 SLC30A4O14863 429 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 MDM4O15151 490 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 HOXC11O43248 304 aaPredicted RBP18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 GREM1O60565 184 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 HNRNPLP14866 589 aaKnown RBP eCLIP18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 TIE1P35590 1138 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 BECN1Q14457 450 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 SF3A2Q15428 464 aaKnown RBP18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 CRY1Q16526 586 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 EMC10Q5UCC4 262 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ANO7Q6IWH7 933 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 RASSF3Q86WH2 238 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 TMEM25Q86YD3 366 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ETFBKMTQ8IXQ9 262 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 PHTF2Q8N3S3 785 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ALLCQ8N6M5 410 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 NAT16Q8N8M0 369 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 SMOC1Q9H4F8 434 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 ZDHHC4Q9NPG8 344 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 SPHK2Q9NRA0 654 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 NUDT5Q9UKK9 219 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 INVSQ9Y283 1065 aa18.38■□□□□ 0.53
MAP1LC3B-207ENST00000565788 MYO18AQ92614 2054 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms