RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 TLR5O60602 858 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 CAVIN2O95810 425 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 OLFM2O95897 454 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ZNF806P0C7X5 589 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 EPB41P11171 864 aaKnown RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 RARGP13631 454 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 GTF2H1P32780 548 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 WASP42768 502 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 PRCPP42785 496 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 PGFP49763 221 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 SLC8A3P57103 927 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 NUCB2P80303 420 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 KDSRQ06136 332 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 GOLGA8FQ08AF8 430 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 GOLGA8DPQ0D2H9 430 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 CRY1Q16526 586 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 NFIL3Q16649 462 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 EDRF1Q3B7T1 1238 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 EOGTQ5NDL2 527 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 C10orf120Q5SQS8 335 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ANKRD40Q6AI12 368 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ANO7Q6IWH7 933 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 HTR3DQ70Z44 454 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 TMEM25Q86YD3 366 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 BBS7Q8IWZ6 715 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 TXNDC5Q8NBS9 432 aaKnown RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 FBXL13Q8NEE6 735 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ZMIZ2Q8NF64 920 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ERCC4Q92889 916 aaPredicted RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 TATDN2Q93075 761 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 OTUB2Q96DC9 234 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ZC3H10Q96K80 434 aaKnown RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 TWNKQ96RR1 684 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 KLF16Q9BXK1 252 aaPredicted RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 DUSP16Q9BY84 665 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 SMOC1Q9H4F8 434 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 APOBEC3GQ9HC16 384 aaKnown RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 TMEM8AQ9HCN3 771 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 ZDHHC4Q9NPG8 344 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 SPHK2Q9NRA0 654 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 RAB20Q9NX57 234 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 EBF1Q9UH73 591 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 DNMT3LQ9UJW3 386 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 NAGPAQ9UK23 515 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 LSM7Q9UK45 103 aaKnown RBP6.77□□□□□ -1.33
TCF4-228ENST00000565393 NUDT5Q9UKK9 219 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 SCML2Q9UQR0 700 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 MYH15Q9Y2K3 1946 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 FAM92AA1XBS5 289 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 NEDD8-MDP1E9PL57 170 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 SGK1O00141 431 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 SLC30A4O14863 429 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 CYP26A1O43174 497 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 CILPO75339 1184 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 HMBSP08397 361 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 ZDHHC11BP0C7U3 371 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 RALAP11233 206 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 EIF2DP41214 584 aaKnown RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 DHPSP49366 369 aaPredicted RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 TUBP50607 506 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 FKBP3Q00688 224 aaKnown RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 LRMPQ12912 555 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 BYSLQ13895 437 aaKnown RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 GAB4Q2WGN9 574 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 PLK5Q496M5 336 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 DCAF17Q5H9S7 520 aaPredicted RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 PPM1JQ5JR12 505 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 C10orf76Q5T2E6 689 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 PPP1R26Q5T8A7 1209 aaPredicted RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 ZNF658Q5TYW1 1059 aaPredicted RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 TMEM92Q6UXU6 159 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 CLEC20AQ6ZU45 233 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 RSRC2Q7L4I2 434 aaKnown RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 TADA2BQ86TJ2 420 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 C12orf40Q86WS4 652 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 MIB1Q86YT6 1006 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 SFTPA1Q8IWL2 248 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 FMR1NBQ8N0W7 255 aaPredicted RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 TTC39CQ8N584 583 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 IL17RCQ8NAC3 791 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 WHAMMQ8TF30 809 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 HMGB4Q8WW32 186 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 RLN3Q8WXF3 142 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 SEMA4DQ92854 862 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 SMARCE1Q969G3 411 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 WBP2Q969T9 261 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 GSDMAQ96QA5 445 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 XPO6Q96QU8 1125 aaKnown RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 BBS2Q9BXC9 721 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 DUSP15Q9H1R2 295 aaPredicted RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 VPS45Q9NRW7 570 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 CISHQ9NSE2 258 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 DNAJC17Q9NVM6 304 aaKnown RBP6.76□□□□□ -1.33
TCF4-228ENST00000565393 OSER1Q9NX31 292 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 WDR35Q9P2L0 1181 aa6.76□□□□□ -1.33
TCF4-228ENST00000565393 MMP17Q9ULZ9 603 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms