RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 BHLHE41Q9C0J9 482 aaPredicted RBP5.42□□□□□ -1.54
CAPN3-214ENST00000565274 VPS16Q9H269 839 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 VPS11Q9H270 941 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 BLZF1Q9H2G9 400 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 PLEKHA4Q9H4M7 779 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 KIF9Q9HAQ2 790 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 PCDH18Q9HCL0 1135 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 KLHL11Q9NVR0 708 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 TRIM10Q9UDY6 481 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 ADAMTS1Q9UHI8 967 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 ZNF180Q9UJW8 692 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 GUCA1BQ9UMX6 200 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 SNX12Q9UMY4 172 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 AP4E1Q9UPM8 1137 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 SIK3Q9Y2K2 1263 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 GDAQ9Y2T3 454 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 PCDHB12Q9Y5F1 795 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 MYH8P13535 1937 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 LAMB1P07942 1786 aa5.42□□□□□ -1.54
CAPN3-214ENST00000565274 TNRC6CQ9HCJ0 1690 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 A0A0G2JPF8 293 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ARHGAP10A1A4S6 786 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 WTIPA6NIX2 430 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 BTNL10A8MVZ5 291 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HNRNPCL3B7ZW38 293 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ANKRD65E5RJM6 399 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 SGK1O00141 431 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CES2O00748 559 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TREHO43280 583 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 MTSS1O43312 755 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 STRNO43815 780 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 EDIL3O43854 480 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 EXTL3O43909 919 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ACSL4O60488 711 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HSF2BPO75031 334 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 MAFO75444 373 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 RFPL1O75677 317 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ABLIM3O94929 683 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HSPA4LO95757 839 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 FESP07332 822 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CTSBP07858 339 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CTSHP09668 335 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HNRNPCL4P0DMR1 293 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 AKR1B1P15121 316 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HPGDP15428 266 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 PDGFRAP16234 1089 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TCP1P17987 556 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HMGB2P26583 209 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HNRNPH1P31943 449 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 GCLCP48506 637 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TUFMP49411 452 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 LIG3P49916 1009 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 PMS1P54277 932 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 HADHBP55084 474 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 GABPAQ06546 454 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 DDR1Q08345 913 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TRAP1Q12931 704 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 STK4Q13043 487 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 MAP7Q14244 749 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 PLCL1Q15111 1095 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ASTE1Q2TB18 679 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 FBXO43Q4G163 708 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TMEM119Q4V9L6 283 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ZCWPW2Q504Y3 356 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 LRRC23Q53EV4 343 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CEP55Q53EZ4 464 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 GLE1Q53GS7 698 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ASPRV1Q53RT3 343 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ZNF362Q5T0B9 420 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ZNF648Q5T619 568 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 NDUFAF5Q5TEU4 345 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 PEAR1Q5VY43 1037 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CWF19L1Q69YN2 538 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ANKRD40Q6AI12 368 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ITPRIPL1Q6GPH6 555 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 OR7E24Q6IFN5 339 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 TMEM53Q6P2H8 277 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 MOXD1Q6UVY6 613 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 KDM7AQ6ZMT4 941 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 FAM47EQ6ZV65 393 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 BNIPLQ7Z465 357 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 GALNTL5Q7Z4T8 443 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 YTHDF3Q7Z739 585 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 VSIG1Q86XK7 387 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 MREGQ8N565 214 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CAMKK1Q8N5S9 505 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 PPM1NQ8N819 430 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 C7orf31Q8N865 590 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 C2orf69Q8N8R5 385 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 BCAS4Q8TDM0 211 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 NSUN6Q8TEA1 469 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 LRRC15Q8TF66 581 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 CUL5Q93034 780 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ATP6V0A1Q93050 837 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 PPP2R3CQ969Q6 453 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 SGK3Q96BR1 496 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 MTMR8Q96EF0 704 aa5.41□□□□□ -1.54
CAPN3-214ENST00000565274 RRP36Q96EU6 259 aaKnown RBP5.41□□□□□ -1.54
CAPN3-214ENST00000565274 ARL5BQ96KC2 179 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms