RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 CYTH2Q99418 400 aa23.28■■□□□ 1.32
SPSB3-206ENST00000564709 USP29Q9HBJ7 922 aa23.28■■□□□ 1.32
SPSB3-206ENST00000564709 SSU72Q9NP77 194 aaKnown RBP23.28■■□□□ 1.32
SPSB3-206ENST00000564709 TEX264Q9Y6I9 313 aa23.28■■□□□ 1.32
SPSB3-206ENST00000564709 NPTXRO95502 500 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 ADORA2AP29274 412 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 PPP6R3Q5H9R7 873 aaPredicted RBP23.27■■□□□ 1.32
SPSB3-206ENST00000564709 PPTC7Q8NI37 304 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 SNRNP25Q9BV90 132 aaKnown RBP23.27■■□□□ 1.32
SPSB3-206ENST00000564709 PCDH18Q9HCL0 1135 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 RNF181Q9P0P0 153 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 HAO1Q9UJM8 370 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 PLXNB2O15031 1838 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 A0A1B0GUA9 196 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 FAM155BO75949 473 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 FAAP100Q0VG06 881 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 KIZQ2M2Z5 673 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 GLRA4Q5JXX5 417 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 PRPF39Q86UA1 669 aaKnown RBP23.27■■□□□ 1.32
SPSB3-206ENST00000564709 PCDH19Q8TAB3 1148 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 STAMBPL1Q96FJ0 436 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 ZMAT2Q96NC0 199 aaKnown RBP23.27■■□□□ 1.32
SPSB3-206ENST00000564709 TUBGCP4Q9UGJ1 667 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 HES2Q9Y543 173 aa23.27■■□□□ 1.32
SPSB3-206ENST00000564709 H3BRB1 525 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 APOL1O14791 398 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 MT-ND3P03897 115 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 EZRP15311 586 aaKnown RBP23.26■■□□□ 1.31
SPSB3-206ENST00000564709 BCAR1P56945 870 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 ACCSLQ4AC99 568 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 SMYD5Q6GMV2 418 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 ZNF449Q6P9G9 518 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 PTPRN2Q92932 1015 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 TUT1Q9H6E5 874 aaKnown RBP23.26■■□□□ 1.31
SPSB3-206ENST00000564709 TXLNGQ9NUQ3 528 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 SNTG2Q9NY99 539 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 IKBKGQ9Y6K9 419 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 SMAPO00193 183 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 GABBR2O75899 941 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 ZBED1O96006 694 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 SDC4P31431 198 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 YWHAZP63104 245 aaKnown RBP23.26■■□□□ 1.31
SPSB3-206ENST00000564709 ZNF200P98182 395 aaPredicted RBP23.26■■□□□ 1.31
SPSB3-206ENST00000564709 GRIK4Q16099 956 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 MARCH8Q5T0T0 291 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 ZNF276Q8N554 614 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 CLEC4CQ8WTT0 213 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 MAGEB5Q9BZ81 275 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 DCTN4Q9UJW0 460 aa23.26■■□□□ 1.31
SPSB3-206ENST00000564709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 LPXNO60711 386 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 INHBAP08476 426 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 ATXN1P54253 815 aaKnown RBP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 MAP7D3Q8IWC1 876 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 KHSRPQ92945 711 aaKnown RBP eCLIP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 UTP4Q969X6 686 aaKnown RBP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 C18orf25Q96B23 403 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 DPEP3Q9H4B8 488 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 CHADO15335 359 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 PAPSS1O43252 624 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 SKIV2L2P42285 1042 aaKnown RBP23.25■■□□□ 1.31
SPSB3-206ENST00000564709 KYAT1Q16773 422 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 ZNF792Q3KQV3 632 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 PLEKHG4Q58EX7 1191 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 RFWD2Q8NHY2 731 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 CCDC110Q8TBZ0 833 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 SLC44A1Q8WWI5 657 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 CYLDQ9NQC7 956 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 PAK5Q9P286 719 aa23.25■■□□□ 1.31
SPSB3-206ENST00000564709 DCTN3O75935 186 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 CBX6O95503 412 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 PYGBP11216 843 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 ALADP13716 330 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 ALDH3A1P30838 453 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 GRM5P41594 1212 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 SLC6A3Q01959 620 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 CTAGE3PQ8IX95 158 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 FAM111AQ96PZ2 611 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 FAM49AQ9H0Q0 323 aaPredicted RBP23.24■■□□□ 1.31
SPSB3-206ENST00000564709 MCM8Q9UJA3 840 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 KIAA1257Q9ULG3 409 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 NUMBLQ9Y6R0 609 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 IQANK1A0A1B0GTG1 560 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 TM9SF1O15321 606 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 STAU1O95793 577 aaKnown RBP23.24■■□□□ 1.31
SPSB3-206ENST00000564709 APRTP07741 180 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 MAP2K2P36507 400 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 HDAC4P56524 1084 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 PDK2Q15119 407 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 PKDCCQ504Y2 493 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 FYB2Q5VWT5 728 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 NLRP9Q7RTR0 991 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 C7orf31Q8N865 590 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 TRIM56Q9BRZ2 755 aaKnown RBP23.24■■□□□ 1.31
SPSB3-206ENST00000564709 EIF2AQ9BY44 585 aaKnown RBP23.24■■□□□ 1.31
SPSB3-206ENST00000564709 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.24■■□□□ 1.31
SPSB3-206ENST00000564709 TTLL3Q9Y4R7 772 aa23.24■■□□□ 1.31
SPSB3-206ENST00000564709 DPYSL4O14531 572 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 TSHRP16473 764 aa23.23■■□□□ 1.31
SPSB3-206ENST00000564709 BOLA3Q53S33 107 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms