RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 VPS45Q9NRW7 570 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 SMPD4Q9NXE4 827 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 MMP17Q9ULZ9 603 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 SH3BP1Q9Y3L3 701 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 PCDHA5Q9Y5H7 936 aa12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-204ENST00000564664 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 HOXC11O43248 304 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 KAT7O95251 611 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 PSEN1P49768 467 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 MAP3K7CLP57077 242 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 CRY1Q16526 586 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 PLK5Q496M5 336 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 KRT39Q6A163 491 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 HTR3DQ70Z44 454 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 C12orf50Q8NA57 414 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 ZFRQ96KR1 1074 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 CNOT6LQ96LI5 555 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 HHIPQ96QV1 700 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 ARRDC1-AS1Q9H2J1 176 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
GTF3C1-204ENST00000564664 CETN3O15182 167 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 TLR5O60602 858 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 CILPO75339 1184 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 ATP5C1P36542 298 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 SLC6A11P48066 632 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 GCLMP48507 274 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 PPP3CAQ08209 521 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 COBLL1Q53SF7 1204 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 C2orf27AQ580R0 203 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 EOGTQ5NDL2 527 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 SPOPLQ6IQ16 392 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 TRMT11Q7Z4G4 463 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 C12orf29Q8N999 325 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 GSDMAQ96QA5 445 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 DUSP16Q9BY84 665 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 DUSP15Q9H1R2 295 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 CCSER2Q9H7U1 834 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 CYLDQ9NQC7 956 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 ARHGEF4Q9NR80 690 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 SPHK2Q9NRA0 654 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 GMIPQ9P107 970 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 WDR35Q9P2L0 1181 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
GTF3C1-204ENST00000564664 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 BEST1O76090 585 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 CCDC130P13994 396 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 HOXC13P31276 330 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 PLA2G4AP47712 749 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 SEC13P55735 322 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 AASDHQ4L235 1098 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 ZCWPW2Q504Y3 356 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 SPDYCQ5MJ68 293 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 LY6G5CQ5SRR4 150 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 IL31Q6EBC2 164 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 TAS1R2Q8TE23 839 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 KLF16Q9BXK1 252 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 APOBEC3GQ9HC16 384 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.352e-10■■■■■ 108.7
GTF3C1-204ENST00000564664 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 MAPK8IP1Q9UQF2 711 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 ZNF510Q9Y2H8 683 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 STARD13Q9Y3M8 1113 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
GTF3C1-204ENST00000564664 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 GOLGA6L4A6NEF3 574 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 HHLA1C9JL84 531 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 SMC2O95347 1197 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 TRIM49P0CI25 452 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 TRIM49CP0CI26 452 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 ACO1P21399 889 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 ADORA2BP29275 332 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 MPLP40238 635 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 DPP6P42658 865 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 KIF11P52732 1056 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
GTF3C1-204ENST00000564664 IL17RCQ8NAC3 791 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms