RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 PPP6R3Q5H9R7 873 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 BORAQ6PGQ7 559 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 FRMD7Q6ZUT3 714 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 SLC9A9Q8IVB4 645 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 WDR75Q8IWA0 830 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 POMGNT1Q8WZA1 660 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 CAAP1Q9H8G2 361 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 XAB2Q9HCS7 855 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 SEL1LQ9UBV2 794 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 PPME1Q9Y570 386 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 IVNS1ABPQ9Y6Y0 642 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 ADRB2P07550 413 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 LDHCP07864 332 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 CFHP08603 1231 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 MRPS5P82675 430 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 TEX44Q53QW1 395 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 CBWD2Q8IUF1 395 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 SLC44A1Q8WWI5 657 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 CFAP36Q96G28 342 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 VPS50Q96JG6 964 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 HSD17B14Q9BPX1 270 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 TMEM98Q9Y2Y6 226 aa12.82□□□□□ -0.36
SCAMP2-204ENST00000563829 MATN2O00339 956 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TBX3O15119 743 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 CDK9P50750 372 aaKnown RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 ITGA7Q13683 1181 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 ADRM1Q16186 407 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 NRF1Q16656 503 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TXNRD3NBQ6F5E7 133 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 POLNQ7Z5Q5 900 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 ZBTB46Q86UZ6 589 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 CPNE9Q8IYJ1 553 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 SH2D3AQ9BRG2 576 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 HOMER2Q9NSB8 354 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TBC1D23Q9NUY8 699 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TRNAU1APQ9NX07 287 aaKnown RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 C6orf203Q9P0P8 240 aaPredicted RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 AVILO75366 819 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 PHKA2P46019 1235 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 PSMC5P62195 406 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 VWA5B1Q5TIE3 1220 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 HSPH1Q92598 858 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 ZNFX1Q9P2E3 1918 aaKnown RBP12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 KLHL2O95198 593 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 DSG3P32926 999 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 MAMLD1Q13495 774 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 OGFOD2Q6N063 350 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 SPOCD1Q6ZMY3 1216 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 PCGF5Q86SE9 256 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 RNF148Q8N7C7 305 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 NAT8LQ8N9F0 302 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 RSAD2Q8WXG1 361 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TCHPQ9BT92 498 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 SIRPGQ9P1W8 387 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TMED5Q9Y3A6 229 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 NFASCO94856 1347 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 UBE4BO95155 1302 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
SCAMP2-204ENST00000563829 TMX2-CTNND1H3BSU7 103 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 PSMC3P17980 439 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 WASHC5Q12768 1159 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 KRT39Q6A163 491 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 HEPHQ9BQS7 1158 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 HAUS8Q9BT25 410 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 NUF2Q9BZD4 464 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 EBF1Q9UH73 591 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 DRG1Q9Y295 367 aaKnown RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 FADS3Q9Y5Q0 445 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 ARHGEF35A5YM69 484 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 DCXO43602 365 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 ALDH2P05091 517 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 EIF2B2P49770 351 aaKnown RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 GPATCH4Q5T3I0 446 aaKnown RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 TTC39BQ5VTQ0 682 aaPredicted RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 CLVS1Q8IUQ0 354 aaPredicted RBP12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 PHTF2Q8N3S3 785 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 NLRP7Q8WX94 980 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 WRNIP1Q96S55 665 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
SCAMP2-204ENST00000563829 DDX60LQ5H9U9 1706 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms