RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 GPRIN1Q7Z2K8 1008 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 TADA2BQ86TJ2 420 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 ANKRD52Q8NB46 1076 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 RUBCNQ92622 972 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 CDK5RAP1Q96SZ6 601 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 CCSER2Q9H7U1 834 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 SMPD4Q9NXE4 827 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 CLIC5Q9NZA1 410 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 CTNND2Q9UQB3 1225 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 DMDP11532 3685 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 RIF1Q5UIP0 2472 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 BIN1O00499 593 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 EGFP01133 1207 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 CYP17A1P05093 508 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 PAEPP09466 180 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 ATP5C1P36542 298 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 OPRD1P41143 372 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 BCAT1P54687 386 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 GCNT1Q02742 428 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 DHCR24Q15392 516 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 GAB4Q2WGN9 574 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 ZNF394Q53GI3 561 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 SGO2Q562F6 1265 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 HTR3DQ70Z44 454 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 ARHGAP18Q8N392 663 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 CAMKK1Q8N5S9 505 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 NT5C1BQ96P26 610 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 FBRSL1Q9HCM7 1045 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 RWDD2AQ9UIY3 292 aa12.88□□□□□ -0.35
NSMCE1-204ENST00000563273 GVINP1Q7Z2Y8 2422 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 A0A0A0MRY4 1105 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 CYP26A1O43174 497 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 GREM1O60565 184 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 RNF40O75150 1001 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 VDRP11473 427 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 PGFP49763 221 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 STILQ15468 1287 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 HSF5Q4G112 596 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 PM20D1Q6GTS8 502 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 RHBDF2Q6PJF5 856 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 SYT13Q7L8C5 426 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 WDR5BQ86VZ2 330 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 SCML4Q8N228 414 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 GPR161Q8N6U8 529 aaKnown RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 MLKLQ8NB16 471 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 ACDQ96AP0 544 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 KLF16Q9BXK1 252 aaPredicted RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 NACA2Q9H009 215 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 OSER1Q9NX31 292 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 SMG5Q9UPR3 1016 aaKnown RBP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.87□□□□□ -0.35
NSMCE1-204ENST00000563273 FAM186AA6NE01 2351 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 A0A1W2PQH9 124 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 O00370 1275 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 SETSIPP0DME0 302 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 RALAP11233 206 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 ADH5P11766 374 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 RARGP13631 454 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 PLA2G4AP47712 749 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 GAD2Q05329 585 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 BST2Q10589 180 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 KCNH2Q12809 1159 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 PKDCCQ504Y2 493 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 SCD5Q86SK9 330 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 PIGZQ86VD9 579 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 TTC30AQ86WT1 665 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 EHBP1Q8NDI1 1231 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 KCTD13Q8WZ19 329 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 PNKPQ96T60 521 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 HESX1Q9UBX0 185 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 TSPAN16Q9UKR8 245 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 PTPRZ1P23471 2315 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 FRYLO94915 3013 aa12.86□□□□□ -0.35
NSMCE1-204ENST00000563273 FANCMQ8IYD8 2048 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms