RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 MDH1BQ5I0G3 518 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 MFSD5Q6N075 450 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 ZC3H18Q86VM9 953 aaKnown RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 HSFY1Q96LI6 401 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 DUSP16Q9BY84 665 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 ROPN1BQ9BZX4 212 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 ROPN1Q9HAT0 212 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 CRTAC1Q9NQ79 661 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 SLC38A7Q9NVC3 462 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 FARP1Q9Y4F1 1045 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 GOLGA8MH3BSY2 632 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 GPR182O15218 404 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 BANF1O75531 89 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 CTCFP49711 727 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 ADCY1Q08828 1119 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 PLD5Q8N7P1 536 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 PCDH19Q8TAB3 1148 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 CENPIQ92674 756 aaPredicted RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 HHIPL1Q96JK4 782 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 CYLDQ9NQC7 956 aa19.95■□□□□ 0.78
SMPD3-203ENST00000563226 TRMT13Q9NUP7 481 aaKnown RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 DDX43Q9NXZ2 648 aaKnown RBP19.95■□□□□ 0.78
SMPD3-203ENST00000563226 FOXO6A8MYZ6 492 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 ALDH1A1P00352 501 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 ACADSBP45954 432 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 PDK2Q15119 407 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 ANKRD20A8PQ5CZ79 823 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 CROCCP2Q86T23 111 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 HACE1Q8IYU2 909 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 RNF169Q8NCN4 708 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 CPT1BQ92523 772 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 PKNOX2Q96KN3 472 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 TBCBQ99426 244 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 FOXP3Q9BZS1 431 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 EPN3Q9H201 632 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 SHOC2Q9UQ13 582 aa19.94■□□□□ 0.78
SMPD3-203ENST00000563226 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.94■□□□□ 0.78
SMPD3-203ENST00000563226 TDRD15B5MCY1 1934 aaKnown RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 TCRBV7S3A2A0A539 114 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 MDM4O15151 490 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 MAP3K6O95382 1288 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 NPR3P17342 541 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 SCNN1AP37088 669 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 MMP13P45452 471 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 CCT5P48643 541 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 NDUFV1P49821 464 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 TFDP2Q14188 446 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 LPIN1Q14693 890 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 PPP6R3Q5H9R7 873 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 CLEC20AQ6ZU45 233 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 MRPL10Q7Z7H8 261 aaKnown RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 P3H4Q92791 437 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 SELENOSQ9BQE4 189 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 PPANQ9NQ55 473 aaKnown RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 RSPH14Q9UHP6 348 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 GIT1Q9Y2X7 761 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 ZNF638Q14966 1978 aaKnown RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 TSC2P49815 1807 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 PITX1P78337 314 aaPredicted RBP19.93■□□□□ 0.78
SMPD3-203ENST00000563226 ROR1Q01973 937 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 MAP7D3Q8IWC1 876 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 CCDC185Q8N715 623 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 LRRN4Q8WUT4 740 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 MED10Q9BTT4 135 aa19.93■□□□□ 0.78
SMPD3-203ENST00000563226 I3L4J1 428 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 CST5P28325 142 aaPredicted RBP19.92■□□□□ 0.78
SMPD3-203ENST00000563226 SP3Q02447 781 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 ERMARDQ5T6L9 678 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 DARS2Q6PI48 645 aaKnown RBP19.92■□□□□ 0.78
SMPD3-203ENST00000563226 ARCQ7LC44 396 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 EXOC3L1Q86VI1 746 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 DEFB106AQ8N104 65 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 NAT8LQ8N9F0 302 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 SERPINB12Q96P63 405 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 DNAI2Q9GZS0 605 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 KRT82Q9NSB4 513 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 TMEM30AQ9NV96 361 aa19.92■□□□□ 0.78
SMPD3-203ENST00000563226 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.92■□□□□ 0.78
SMPD3-203ENST00000563226 MYBPHLA2RUH7 354 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 KIF3CO14782 793 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 APOL1O14791 398 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 TMEM63AO94886 807 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 POMCP01189 267 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 L1CAMP32004 1257 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 MAP3K7CLP57077 242 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 DSC3Q14574 896 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 OTUD1Q5VV17 481 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 SLC9A4Q6AI14 798 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 DSTYKQ6XUX3 929 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 PPIL6Q8IXY8 311 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CCDC13Q8IYE1 715 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 FAM149B1Q96BN6 582 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 FAF2Q96CS3 445 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 SYT15Q9BQS2 421 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 DHX35Q9H5Z1 703 aaKnown RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 MTMR10Q9NXD2 777 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 CWC15Q9P013 229 aaKnown RBP19.91■□□□□ 0.78
SMPD3-203ENST00000563226 HEY1Q9Y5J3 304 aa19.91■□□□□ 0.78
SMPD3-203ENST00000563226 H7C0C1 242 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms