RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 CDKAL1Q5VV42 579 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 IL27RAQ6UWB1 636 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.54□□□□□ -1.36
TCF4-213ENST00000562543 MRPL10Q7Z7H8 261 aaKnown RBP6.54□□□□□ -1.36
TCF4-213ENST00000562543 TTC30AQ86WT1 665 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 DCBLD1Q8N8Z6 715 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 TRIML1Q8N9V2 468 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 SMARCC2Q8TAQ2 1214 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 RFFLQ8WZ73 363 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 KIRREL1Q96J84 757 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 VCPIP1Q96JH7 1222 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 DIRC2Q96SL1 478 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 COLEC11Q9BWP8 271 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 AMNQ9BXJ7 453 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 LRRCC1Q9C099 1032 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 SLITRK6Q9H5Y7 841 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 ASCL3Q9NQ33 180 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 FTSJ1Q9UET6 329 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 TBX20Q9UMR3 447 aa6.54□□□□□ -1.36
TCF4-213ENST00000562543 UBE4BO95155 1302 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 A0A1B0GTW7 788 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 CSDE1O75534 798 aaKnown RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 TSPAN15O95858 294 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 GLI1P08151 1106 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 GNAI3P08754 354 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 GLDCP23378 1020 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 OR1D2P34982 312 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 SREBF1P36956 1147 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 MCM2P49736 904 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 ACADVLP49748 655 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 PSMD2Q13200 908 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 RUNX3Q13761 415 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 ZNF484Q5JVG2 852 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 CAPRIN2Q6IMN6 1127 aaKnown RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 NLRX1Q86UT6 975 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 WDR63Q8IWG1 891 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 ADGRF4Q8IZF3 695 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 LSMEM2Q8N112 164 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 SLC34A3Q8N130 599 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 METTL13Q8N6R0 699 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 LEMD2Q8NC56 503 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 C3orf58Q8NDZ4 430 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 BHLHE22Q8NFJ8 381 aaPredicted RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 BPIFB1Q8TDL5 484 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 ALKBH8Q96BT7 664 aaKnown RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 ZNF668Q96K58 619 aaPredicted RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 DMRTB1Q96MA1 342 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 POLR3CQ9BUI4 534 aaPredicted RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.53□□□□□ -1.361e-6■■■■□ 20.9
TCF4-213ENST00000562543 SEMA3GQ9NS98 782 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 CLCA2Q9UQC9 943 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 PIN4Q9Y237 131 aaKnown RBP6.53□□□□□ -1.36
TCF4-213ENST00000562543 AKT3Q9Y243 479 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 PCDHB2Q9Y5E7 798 aa6.53□□□□□ -1.36
TCF4-213ENST00000562543 IGHV1OR15-9A0A0B4J2B8 117 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 ANTXRLA6NF34 631 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 GCOM1H8Y6P7 765 aaPredicted RBP6.52□□□□□ -1.37
TCF4-213ENST00000562543 ENC1O14682 589 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 SLITRK5O94991 958 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 PRAMEF12O95522 483 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 MPOP05164 745 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 POLR2MP0CAP2 368 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 ZSCAN22P10073 491 aaPredicted RBP6.52□□□□□ -1.37
TCF4-213ENST00000562543 AMPD2Q01433 879 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 DNAJC3Q13217 504 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 STXBP5Q5T5C0 1151 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 PCNX4Q63HM2 1172 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 CCDC26Q8TAB7 109 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 RIN3Q8TB24 985 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 HMGB4Q8WW32 186 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 SSH1Q8WYL5 1049 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 SGF29Q96ES7 293 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 ZNF419Q96HQ0 510 aaPredicted RBP6.52□□□□□ -1.37
TCF4-213ENST00000562543 CDHR1Q96JP9 859 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 MAP7D2Q96T17 732 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 MMS19Q96T76 1030 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 RBCK1Q9BYM8 510 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 THSD1Q9NS62 852 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 PAG1Q9NWQ8 432 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 BCCIPQ9P287 314 aaKnown RBP eCLIP6.52□□□□□ -1.37
TCF4-213ENST00000562543 MTRRQ9UBK8 725 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 TPCN1Q9ULQ1 816 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 PCDHA4Q9UN74 947 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 PCDHB1Q9Y5F3 818 aa6.52□□□□□ -1.37
TCF4-213ENST00000562543 TP53BP1Q12888 1972 aaPredicted RBP6.51□□□□□ -1.37
TCF4-213ENST00000562543 IGKV6D-21A0A0A0MT36 114 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 H3BS24 57 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 PCDHGA12O60330 932 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 SYNCRIPO60506 623 aaKnown RBP6.51□□□□□ -1.37
TCF4-213ENST00000562543 PPP1R11O60927 126 aaPredicted RBP6.51□□□□□ -1.37
TCF4-213ENST00000562543 SLC3A2P08195 630 aaKnown RBP6.51□□□□□ -1.37
TCF4-213ENST00000562543 IFIT2P09913 472 aaKnown RBP6.51□□□□□ -1.37
TCF4-213ENST00000562543 MYL4P12829 197 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 GJA4P35212 333 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 SCNN1GP51170 649 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 CLCN7P51798 805 aa6.51□□□□□ -1.37
TCF4-213ENST00000562543 GABREP78334 506 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms